Salvelinus sp. IW2-2015 (Arctic char): 111967177
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Entry
111967177 CDS
T05762
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04120
Ubiquitin mediated proteolysis
salp04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
111967177
04120 Ubiquitin mediated proteolysis
111967177
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
salp04121
]
111967177
Enzymes [BR:
salp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111967177
Ubiquitin system [BR:
salp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
111967177
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
zf-RING_11
zf-RING_5
zf-ANAPC11
zf-RING-like
zf-HC5HC2H
FANCL_C
Motif
Other DBs
NCBI-GeneID:
111967177
NCBI-ProteinID:
XP_023847806
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Position
LG8:complement(171739..188364)
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AA seq
620 aa
AA seq
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MVRAALVTATSLALTGAVIAHAYLLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKF
MRKVFFGQLRAAEMEHLIERSWYAVTETCLAFTVFRDDFSPRFVGLFTLLLFIKCFHWLA
EDRVDFMERSPNISWIFHFRVFSLMVLLGVLDFLFVNHACHSIITRGASVQLVFGFEYAI
LMTMVLTTFIKYTLHTVDLQSDNPWDNKAVYMLYTELFTGFIKVVLYMAFMTIMIKVHTF
PLFAIRPMYLAMRQFKKAVTDAVMSRRAIRNMNTLYPDATPEDLLASDNVCIICREEMVT
GAKKLPCNHIFHASCLRSWFQRQQTCPTCRMDVLRASNPNQPPAPAPAQPPAPAAPANAP
VPGPPGNVGPGMMPHFPPGLFPFWGPFPGAAPPAGAAGAPGATEAVGATEAAQTQGAGTT
GASTVGAAPAPGGPMPGFPFPSFPPPPFPSAPWLTMPPPPPPFVSSMPPPPPALSTMSEA
ELRELEQEGRRGLEARLQCLHNIHTLLDAAMLNIDQYLTTVATLTPPQSETSSAAGEASG
SSPPSTSAETQEKDSQSSTATEPEAVNGATGFSQPDSTTLGDSEDQRDGEEVGEDGEPNP
SELRRRRLRKLETTPPPPDH
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgtgcagccctggtgactgccaccagtctggctctgactggcgcagtgattgcc
catgcctacttgctcaaacaccagttctaccccactgtggtctacctcaccaagagtagc
cccagtatggcagtgttgtacatccaggcgtttgtgttggtgttcttgttgggaaagttc
atgcgtaaagtcttcttcggacagctgagagctgcagaaatggagcatctgatagagcga
tcctggtatgccgtcacagagacgtgtctggcctttaccgtgtttagagatgacttctct
ccccgcttcgtaggcctcttcaccctgctgctcttcatcaagtgcttccactggctggct
gaggacagggtggactttatggagagaagtcctaatatatcctggatcttccacttcagg
gtgttctctctgatggtgttgctgggagtcctggacttcctgtttgtcaaccatgcctgt
cacagtatcatcacacgaggggcctctgtccagctggtctttggatttgagtatgccatc
ctgatgacaatggtgctcaccaccttcatcaagtacaccctccacactgtcgacctccag
agtgacaacccctgggataacaaagcagtctacatgctctacaccgagctcttcactggt
ttcatcaaggtcgtcctgtacatggcgttcatgaccatcatgataaaggtgcacaccttc
cccctattcgccatccggcccatgtacctggcgatgaggcagttcaagaaagctgttacg
gatgctgtaatgtcgcggcgagccatccgcaacatgaatacactttacccagatgccact
cctgaagatctgctggcttcagacaacgtgtgtatcatctgtcgtgaagaaatggtgact
ggagccaagaaacttccttgcaaccatatcttccacgcaagttgccttcgttcctggttc
cagagacagcagacgtgtcctacatgtcgtatggatgtcctccgggcctctaaccccaac
cagcctcccgccccagcgcctgcccagcctcctgccccagcagcacctgccaacgcccct
gtccctggtccacctgggaacgttggccctggaatgatgccccacttccccccagggctg
tttcctttctggggccccttccctggagcggccccccctgctggtgctgctggcgcccca
ggggccacagaggcagtaggggccacagaggcagctcagactcagggagctggcaccact
ggggccagtacagtcggtgctgctcctgctccaggaggccctatgcctgggttccccttc
ccctctttccctcccccaccgttcccctcagctccatggctgactatgccaccaccacct
ccaccgtttgtgtcatccatgccccctcctcccccggccctgtccaccatgtcagaggct
gagctgagggagctggagcaggagggccgtagaggcctggaggccagactgcagtgtctc
cacaacattcacactctactggacgctgccatgctcaacatcgaccaatacctcactacc
gtcgccacgctcactcctcctcagtctgaaaccagcagcgctgctggcgaggccagtgga
tcatctcctccctccactagtgcagaaacccaggagaaagactctcagagcagtacagcc
actgaacccgaagctgtgaatggggccacaggtttctcccagccagactctaccacgttg
ggcgacagtgaagaccagagggatggagaggaagtcggggaagacggagagcccaaccct
tcagagctgaggcgccgtcgtctccgcaagctcgagaccacaccccctccacctgaccac
taa
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