KEGG   Salvelinus sp. IW2-2015 (Arctic char): 111967325
Entry
111967325         CDS       T05762                                 
Symbol
rnf4
Name
(RefSeq) E3 ubiquitin-protein ligase RNF4
  KO
K22651  E3 ubiquitin-protein ligase RNF4 [EC:2.3.2.27]
Organism
salp  Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:salp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:salp04121]
    111967325 (rnf4)
Enzymes [BR:salp01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     111967325 (rnf4)
Ubiquitin system [BR:salp04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    111967325 (rnf4)
SSDB
Motif
Pfam: zf-RING_2 zf-C3HC4_2 zf-C3HC4 zf-RING_5 zf-RING_UBOX zf-C3HC4_3 zf_RING_Vps8 Prok-RING_4 zf-RING_4 RING_XB3-XBAT31 zf-rbx1 zf-C3HC4_4 TerY_C zf-UDP zf-RING_11 IBR_1 zf-RING_10 zf-Nse Zn_ribbon_6 zf-RING_6 zf-RING_16 DZR Rtf2 C5HCH
Other DBs
NCBI-GeneID: 111967325
NCBI-ProteinID: XP_023848033
LinkDB
Position
LG8:complement(5678186..5681687)
AA seq 188 aa
MSSTTQRKRRTGAPSSSRRTAKSSRVTTTVPLRAAAAAETIAVLESSRTSSEEVVDLTCE
GSESTVVDLTNNDSVVVVDEGLRGRRGLGGESYVLSSDEEGDANGSLSADLLSSLQASSR
ARSTPGTVSCPVCMDSYAEIIESGRLVVSTKCGHLFCSQCLRDSLSRSHTCPTCRKKLTH
KQYHPIYI
NT seq 567 nt   +upstreamnt  +downstreamnt
atgagcagtacaacacagaggaagagaaggactggagccccctcaagttccagacgcaca
gccaagagtagcagagtcaccaccactgtgccacttcgtgcagcagccgctgctgagacc
attgctgtgctggagagcagtaggactagcagtgaggaggtggtggacttgacatgtgaa
ggttctgagtcaactgtggttgacttgaccaacaatgattctgtggtggttgtcgatgaa
gggcttcggggcagacgtggacttggcggtgagagttacgtgctgagcagtgatgaggag
ggggatgccaatgggagcctcagtgctgacctcctatcttctctacaggccagcagtaga
gccaggtctacgccaggtacagtcagctgcccagtgtgtatggactcctatgctgagatc
attgaaagtggcagactagtggtctccacaaaatgtggtcaccttttctgcagtcagtgc
ctccgcgactcgctgtcgagatcccacacttgtccaacctgcagaaagaaactgactcac
aagcaataccaccccatatacatctaa

DBGET integrated database retrieval system