Salvelinus sp. IW2-2015 (Arctic char): 111967386
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Entry
111967386 CDS
T05762
Symbol
ap5b1
Name
(RefSeq) AP-5 complex subunit beta-1
KO
K19022
AP-5 complex subunit beta-1
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
salp03400
]
111967386 (ap5b1)
DNA repair and recombination proteins [BR:
salp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
111967386 (ap5b1)
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Gene cluster
GFIT
Motif
Pfam:
AP5B1_middle
AP5B1_barrel
AP5B1_C
AP5B1_N
DUF190
Motif
Other DBs
NCBI-GeneID:
111967386
NCBI-ProteinID:
XP_023848129
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Position
LG1:38960473..38964100
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AA seq
956 aa
AA seq
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MSANWPERISAFLRSPSQFLCITTSDIFLAEVLHELRDDRASDLIKVLLLSPLLEHPTLL
CPSVSVGEETALELMSVFAQCSPKSLPLRCHLLLALTSVLLCSCCVSSHTSASQDFLDLL
LQMAQDTNDAQAGAALHPLRTTACDCLRELEACLPGLLSQRLELLSSLRQQENSRLHQAY
TGLHALALRNAVYLLTQQKGAGAGDLKAALGSNEGFVWGEGPNSESHSDLALFSPLTLGP
MGKIPSLQTGLDCKELRSLLSSLLEESYLLTSLSQAALLRRLVEVLAMVPAVSPTIFRAQ
LLRLLGTCKVCLLHTTLLMKAAFTDSLFSAEDEAFLLKRLVGLSQHPLLSTPEKLFYMDC
ILHFPENRPISSGDESLPVLLTPRLAAALVPTVFNDSVSMLARLNLLSLVYLEEGEEDRE
GQGGRGLAYLYDHLTSLLHIVENQASREMVVTFFRASFLFLLHFCHVERYSEDLSQRLCD
LYLRRTRLAPHLINLADRTQDRLEESGWAVALLRALQRTITEAPLSQLTLQDLRWHLRIL
ARVAEEGEVLQRATLNFLLCVITSSSSALCVSGDWRLGNGVLGVCRRLLLHPSLDSLLTP
LADLLQHLTCHYGETDIQDHARLYYTLLTTLSQEKLAGVLAQRGTERGRQAKVRSLSAIM
GETEELTSGLTVHQTERPLLRLVKHEPDECKPEHKPDSEPACETESSPGQGGIEDYRAQF
QSSSFASEITLQYHLTHIGVHDPHFDKLFSIRLHFDLTDGHYEEVSDISVPCLFRTRKPP
TVRLRLKPKQPYHTTLRASAIFTTEDGLSWHSPLADLHVAFPEVFLPLLAPPGWAREKKQ
RVFEGIWGEICSGQSEGDLTNAATSLFCDQLEDLAVGELVEKHFQRYLVSDLDKGRCKVL
FFLPPQSHVLLKVITEEDAVQVHIATDNWKLLPYINSYLEDITKEIHSTQQVNGDV
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcgaactggcccgagaggatctccgcattcttgcgcagcccgtcccagttcttg
tgcatcacgacatcggacatcttcctcgctgaggtcctgcacgagctgcgagatgacagg
gccagtgacctcatcaaggtcctactgttgtccccgctacttgagcaccctactctgctg
tgcccctctgtctctgtgggagaggagaccgccctggagctcatgtctgtgtttgcccag
tgctcccccaaatccctcccgctccgctgccacctcctcctggccctcacctccgtgctc
ctttgctcctgctgtgttagctcacacaccagcgcctcccaagacttcctggaccttctc
ttacagatggcccaggacaccaacgacgcgcaggctggggctgcattacaccccctgagg
acaacagcctgcgactgcctgagggagctggaggcttgcctcccgggcctactatcccaa
cgcttggagctcctgagtagcctgaggcaacaggaaaactccaggcttcaccaggcctac
acggggctccatgccctggcactgaggaatgctgtgtatctgctcacccagcagaaaggg
gctggggctggagacctgaaggctgcactggggagcaacgaggggtttgtgtggggggag
ggtccaaactctgagtcacactcagacttggccctcttctcgcccctcactctgggcccc
atgggaaaaattccttccctgcagacgggcctagactgtaaagagctgagatcgctactc
tcctccctcctagaggagtcctacctgctcacatccctatcccaggctgccctgctgcga
cggctggtggaggtgcttgccatggtgcctgcagtctccccgacaatattcagggcacag
ctgctgcgtctattgggcacatgcaaggtgtgtcttctgcacaccactctgctgatgaag
gctgctttcacagacagcctgttcagcgcagaggatgaggccttcctactaaagcgtctc
gtcggcctgtcccaacaccccctactgagcacgcccgagaagctcttctacatggactgc
atcctgcacttcccagagaaccgaccaatcagcagtggcgacgagagcctgcccgtgctc
ttgacccctcggctagccgcggccctagtgcccactgtgttcaatgatagtgtcagcatg
ctggctagactgaacctactctctctggtctacctggaggaaggagaagaagacagggag
ggacagggggggagaggcctggcctacctgtatgatcacctgacctcccttctccatatc
gtggagaaccaggccagtagggagatggtggtgaccttcttcagggcttccttcctcttc
ctccttcacttctgccacgtggagcgctactctgaggacctgtctcagaggctgtgtgac
ctgtacctcagacgcactcggctggcccctcacctcatcaacctggctgaccggacccag
gaccggctggaggagtcaggctgggctgtggcactgctaagagccctgcaaagaaccatc
acagaggccccgctgtcccagctcaccctgcaagacctccgctggcacctcaggatcctg
gcccgtgtggcagaggaaggggaagtcctccagagggccactctcaactttttgctgtgc
gtcatcacttcctcttcatccgcgctgtgtgtgagcggggactggcgtctggggaacggc
gtgctgggggtgtgtcgacgcctgctcctgcaccccagcttggactcccttctcacaccg
ctggctgatctcctacagcacctcacctgtcattatggtgaaacagacatccaggaccac
gcccgcttgtactacaccctcctcaccactctctcccaggagaagctggctggggtgttg
gcacagaggggaacagaaagggggcggcaggccaaagtgcgctcgctgtctgccatcatg
ggcgagaccgaggaactgaccagcggtctgaccgtgcaccagacagagcgaccgctgctg
aggctggtcaaacatgaaccagatgaatgcaaaccagagcataaaccagacagtgaacca
gcctgtgagactgagagttccccaggacagggagggatagaggactacagagcccagttc
cagagttccagcttcgcctctgaaatcaccctccaataccacctcacacacattggagtt
cacgacccccatttcgacaagctcttcagcatccgcttgcactttgacctcacggacggc
cactatgaggaagtgagtgacatcagcgtgccttgcctgttcaggaccaggaagccccct
acagtgaggctgaggctgaagcccaagcagccgtaccacaccaccctgagagctagcgct
atcttcaccacggaggacggcctctcctggcactccccgctggcagacctacatgtggcc
ttccctgaggtgtttctgcccctcctcgcacccccagggtgggccagggaaaagaagcag
agggtgtttgaggggatctggggtgaaatatgctcagggcagtctgagggggatttgacc
aacgctgcaactagcctgttctgtgatcagttggaggatttggctgtgggtgagctggtg
gagaagcactttcagagatatctggtctcagacttggataaaggcaggtgtaaagtgctg
ttcttcctcccaccccagtctcacgtgctgctgaaggttatcacagaggaggatgccgta
caggttcatattgctacagacaactggaagcttctgccttatattaactcttatctagag
gacattaccaaagagattcacagcacacagcaagtcaatggtgatgtctga
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