Salvelinus sp. IW2-2015 (Arctic char): 111967476
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Entry
111967476 CDS
T05762
Name
(RefSeq) histidine--tRNA ligase, cytoplasmic isoform X1
KO
K01892
histidyl-tRNA synthetase [EC:
6.1.1.21
]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
111967476
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
salp01007
]
111967476
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
salp03016
]
111967476
Enzymes [BR:
salp01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.21 histidine---tRNA ligase
111967476
Amino acid related enzymes [BR:
salp01007
]
Aminoacyl-tRNA synthetase
Class II (A)
111967476
Transfer RNA biogenesis [BR:
salp03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
111967476
Prokaryotic type
111967476
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_His
HGTP_anticodon
HGTP_anticodon2
tRNA-synt_2
WHEP-TRS
tRNA-synt_2d
Motif
Other DBs
NCBI-GeneID:
111967476
NCBI-ProteinID:
XP_023848293
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All DBs
Position
LG8:complement(14380972..14386041)
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AA seq
523 aa
AA seq
DB search
MINLGMASLXLCAGLAGRRSGFCARSLRTLSGMTVSQIDEEVAKLLELKAQLGGDEGRHQ
FTLKTAKGTRDYNPKQMAIREKVFNTIISCFKRHGAENIDTPVFELKETLTGKYGEDSKL
IYDLKDHGGELLSLRYDLTVPFARYLAMNKVTNIKRYHIAKVYRRDNPAMTRGRYREFYQ
CDFDIAGQYDPMIPDAECLKIVHEILSELELGDFRIKVNDRRILDGMFAVCGVPDDKFRT
ICSTVDKLDKMSWEDVRSEMVKEKGLSEEAADQIGQYVSLQGGMDLAERLLQDAKMSQSK
QACAGLTDMKQLFSYLQLFQVTDKVVFDLSLARGLDYYTGVIYEAILTQXGPVPVAAAQN
GAGEKAEEGVSVGSVAGGGRYDGLVGMFDPKGRKVPCVGVSIGIERVFSIMEQKAEASAE
KVRTTETQVMVASAQKNLLEERLRLTAELWNAGIKAEVMYKKNPKLLSQLQHCEDSGIPL
VAILGEQELKDGVVKLRTVHSREEIDVSRAELVEEIKRRTSVV
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgattaacctgggtatggcgtccctgcytctttgtgcggggttggcgggccgtcggtct
ggattttgtgcccgctctctacgcaccctctctgggatgactgtgtctcagattgatgaa
gaagtggccaaactgctagagctgaaggctcagcttggaggagatgaaggcagacaccaa
ttcacgctcaagaccgcaaagggwaccagggactataaccctaagcagatggccatcaga
gagaaagtcttcaacaccatcatcagctgttttaaacgccacggagccgagaacatcgac
acacccgtctttgagctgaaggaaacgttgacaggaaagtatggtgaggattctaagctc
atctacgacctgaaggaccayggaggagagctgctgtcccttagatatgatctcactgtg
cctttcgcccgttacctggccatgaacaaggtcaccaacatcaagcgctaccacattgcc
aaggtctatcgccgtgacaaccccgccatgacccgcggkcgctacagggagttctatcag
tgtgattttgacattgcaggccagtacgaccccatgatcccagacgctgagtgcctgaag
atcgtccacgagatcctgagtgagctggagctgggagacttccgcatcaaggtgaacgac
agacgtattctkgacggaatgtttgcagtgtgtggagttccggatgacaagttccgcacc
atctgctccacagtggacaaactggacaagatgtcttgggaggatgtgaggagtgaaatg
gtgaaggagaagggtctgtctgaggaagcagccgatcagatcggacagtatgtcagcttg
cagggggggatggacctagctgagcgcctgctgcaggatgctaagatgtcacagagcaag
caggcgtgtgccggcctcacagacatgaagcagctcttcagctacctgcagctcttccag
gttacagacaaggtggtgtttgacctgagtctggcccgtgggttggactactacacaggt
gtgatttatgaggccattctgacccagyccggcccggtcccagtggcggcagcccagaac
ggggcgggcgagaaggctgaggaaggtgtgagcgtgggcagcgtggcgggcggcgggcgc
tacgacggcctggtgggcatgttcgaccccaagggcaggaaggtgccgtgtgtgggggtc
agcatcggcatcgagagggtcttctccatcatggagcagaaggctgaggcatcggcggag
aaggtgcgaaccacagagactcaagtcatggtggcctcggcacagaaaaaccttctggag
gagagactccgactgaccgctgaactgtggaacgctgggatcaaggcagaggtgatgtat
aagaagaaccccaagctgctgagccagctgcagcactgtgaggactctgggatccccctg
gtggcgatcctaggggagcaggagctcaaggacggggtggtgaagctccgaacggtccac
agccgagaggagattgacgtgtccagagccgaactagtggaggagatcaagagaaggacc
tcagtcgtctaa
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