Salvelinus sp. IW2-2015 (Arctic char): 111967490
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Entry
111967490 CDS
T05762
Symbol
zcchc7
Name
(RefSeq) zinc finger CCHC domain-containing protein 7
KO
K12597
protein AIR1/2
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111967490 (zcchc7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
salp03019
]
111967490 (zcchc7)
03016 Transfer RNA biogenesis [BR:
salp03016
]
111967490 (zcchc7)
Messenger RNA biogenesis [BR:
salp03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
111967490 (zcchc7)
Transfer RNA biogenesis [BR:
salp03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
111967490 (zcchc7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCHC
NinD
Motif
Other DBs
NCBI-GeneID:
111967490
NCBI-ProteinID:
XP_023848311
LinkDB
All DBs
Position
LG8:complement(14685316..14699902)
Genome browser
AA seq
488 aa
AA seq
DB search
MMMGHQNDEEEGGNKDNRFYIEASSSSEGELGFSQYKQSSSPRAPQATGGNSPLVLAFPL
SSGRALRDVSPLDSSPSPTSRRSLHSERDLDLEYDDEPLEEWMILGGEEQEGDRYIQLNL
GCWSSSSESPSGTEDEELNGKYALKHNWAIIEKDKPRPYRYFTSDRSLTCHNCNKTGHLA
KGCTTPRRRPTCVLCGLQGHVQRACPGRHCHSCGLPSHGYHPCPESPFWNQHCHRCGMAG
HLSDACPDTWRQFHFTTQQEVPLRPHVDHTHKHYRHTAHCYNCSRRGHLGHECTQRRMVS
GTFASLPYVCHYDNKKDIVKLNTRIHRKARELQEEGFMPLLERQRTYVTPGGSSEEERPS
PAPGRKRSLEGRRKTWPERRRERREVKKLRREAQARRAVGTTKSGSDEVVYTREHFKNPH
REPIPPPQKKRRREERRESRSEERSRKNRESERWKKRGGLKRGYLYPRDDLGPMYDHLLS
PKNRVRIS
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgggccaccagaatgatgaggaagagggtggtaataaagacaacagattctac
atcgaggcctccagcagctcagaaggtgagctggggtttagtcagtacaaacagtccagc
tcaccgagagctccccaggccactggaggaaactctcccctagttcttgccttccctctc
tcgtctggccgagctctacgggacgtgtcgccactggacagcagcccaagcccaacctcc
aggcgaagcctccactcagagcgggacctggacctggagtatgatgacgaacccctagag
gagtggatgatcctgggaggagaggagcaggagggagacaggtacatccagctcaacctg
gggtgctggagcagcagttcagagtcgccttctggaacagaggatgaagaactgaatgga
aaatatgctctcaaacacaactgggccataatagagaaggacaagccacgcccataccgc
tatttcacctctgaccggagcctcacctgtcacaactgcaacaagactggacacctggcc
aagggctgtaccaccccgaggaggcgacccacctgtgtgttgtgtgggctccagggccat
gtccagagggcctgtccaggccggcactgccacagctgtgggctcccctcacacgggtac
catccctgccctgaatcccctttctggaaccagcactgccaccgctgtgggatggctggc
cacctatcagacgcttgtccggatacatggagacaattccacttcacaactcagcaggag
gttcccctcaggccacacgttgaccacacccacaaacactacagacacaccgctcactgc
tacaactgctccaggagaggacacctcggccatgagtgtactcagaggaggatggtcagt
gggacgtttgcctcgctcccctacgtctgtcactacgacaacaagaaggacatcgtcaaa
ctgaacaccaggatacacagaaaagccagagagctacaggaggagggcttcatgcctctg
ttagagcggcagaggacctacgtgacaccagggggcagtagtgaagaggagcggccctcc
ccagctccagggaggaagagaagcctggagggcaggaggaagacgtggccggagagacgc
agggagagacgggaggtgaagaagctgaggagagaggcccaagccaggagagcggttggg
acgaccaaatcgggctcagacgaggttgtttacaccagggaacactttaagaacccccac
agagaacccatacctccccctcagaagaagagacgccgtgaggaaagaagggagagcagg
agtgaggagaggagtaggaagaatagagaatctgagaggtggaagaagagaggagggctg
aagcgtgggtacctgtacccccgtgatgacttgggacccatgtatgatcacctcctctcc
cccaaaaatagggtgcggatttcataa
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