Salvelinus sp. IW2-2015 (Arctic char): 111967554
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Entry
111967554 CDS
T05762
Name
(RefSeq) caltractin
KO
K10840
centrin-2
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
111967554
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
salp03019
]
111967554
03036 Chromosome and associated proteins [BR:
salp03036
]
111967554
03400 DNA repair and recombination proteins [BR:
salp03400
]
111967554
Messenger RNA biogenesis [BR:
salp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX-2 complex
111967554
Chromosome and associated proteins [BR:
salp03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
111967554
Centrosome duplication proteins
Centriole replication proteins
111967554
DNA repair and recombination proteins [BR:
salp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
111967554
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_7
EF-hand_1
EF-hand_6
EF-hand_8
EF-hand_9
EF-hand_5
AIF-1
EF_EFCAB10_C
EH
Dockerin_1
SurA_N_3
HerA_C
SurA_N_2
DUF7645
SUB1_ProdP9
SRI
DUF5580_M
MJ1010-like_2nd
LETM1_RBD
CNNM
Motif
Other DBs
NCBI-GeneID:
111967554
NCBI-ProteinID:
XP_023848420
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All DBs
Position
LG8:17002374..17006788
Genome browser
AA seq
171 aa
AA seq
DB search
MASGYRKPNTTSNQRKKAGPKPDLTEEQKQEIREAFDLFDTDGSGTIDVKELKVAMRALG
FEPKKEEIKKMIADIDKEGSGTIDFNDFLCMMTQKMSEKDSKEEILKAFRLFDDDGTGKI
SFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEINEQEFLRIMKKTSLY
NT seq
516 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaggctacagaaaacccaacaccacttccaaccagaggaaaaaggcaggtcct
aaaccagacttgacagaggaacaaaagcaggagatcagagaggcctttgacttgtttgat
acagatgggtcgggcacaattgacgtgaaggaactcaaggttgccatgcgtgcccttggc
tttgaaccaaagaaagaagagatcaagaagatgattgcagacattgacaaggagggctct
gggaccattgattttaatgactttctctgtatgatgacacagaaaatgagtgaaaaagac
tcaaaagaagaaattctgaaggctttccgcttatttgatgatgacggcactggcaaaatc
tccttcaaaaatctaaagagagttgccaaggagctaggcgaaaacctgacagatgaggaa
ttgcaggaaatgattgacgaagcagaccgagatggagatggagagatcaacgagcaggag
tttctaaggataatgaaaaagacaagtctatattga
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integrated database retrieval system