Salvelinus sp. IW2-2015 (Arctic char): 111967617
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Entry
111967617 CDS
T05762
Name
(RefSeq) cullin-4B isoform X1
KO
K10609
cullin 4
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp03420
Nucleotide excision repair
salp04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
111967617
09124 Replication and repair
03420 Nucleotide excision repair
111967617
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
salp04121
]
111967617
03400 DNA repair and recombination proteins [BR:
salp03400
]
111967617
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
salp04147
]
111967617
Ubiquitin system [BR:
salp04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
111967617
DNA repair and recombination proteins [BR:
salp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
111967617
TCR (transcription coupled repair) factors
Cul4-CSA complex
111967617
Exosome [BR:
salp04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
111967617
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
SecA_SW
DUF3292
PG_binding_4
Motif
Other DBs
NCBI-GeneID:
111967617
NCBI-ProteinID:
XP_023848554
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Position
LG8:23376456..23392146
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AA seq
852 aa
AA seq
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MESHVEGLPSPNPPPPTQEGRPTASDVNNDSSSTTNSKKRKINRSEREDIDSISSSPKTH
SSSSSSTSQQIQKKLRFGDSVDFIGLDVKMAEESSSASCSNNTKTVFLAGVVGHHANGLT
KTAGSTTFSNSKPGAAKKLVIKNFKEKPKLPENYTHETWQKLKEAVEAIQNSTSIKYNLE
ELYQAVENLCSHKISARLYKQLRVVCEDHIKAQIDQFREDVLDSTLFLKKIDNCWQDHCR
QMIMIRSIFLFLDRTYVLQNSMLPSIWDMGLELFRFYIISDLKVQSKTIYGILLLIERER
SGETIDRSLLRSLLSMLSDLQIYQDSFEQRFLEETNRLYAAEGQRLMQEREVPEYLHHVN
KRLEEEADRVITYLDQSTQKPLIATVEKQLLGEHLTSTLQKGLNHLLDENRIQDLCLLYQ
LFSRVRGGVLVLLQHWIEYIKAFGSTIVINPEKDKTMVQELLDFKDKVDHIIDICFIKNE
KFVNAMKEAFETFINKRPNKPAELIAKHVDSKLRAGNKEATDEELEKMLDKIMIIFRFIY
GKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDI
MVQFKQCQNIPGNIELTVNILTMGYWPTYIPMEVHLPAEMVRLQEIFKTFYLGKHSGRKL
QWQSTLGHCVLKAEFKEGKKELQVSLFQTLVLLMFNEGEELTLEEIKLATGIEDGELRRT
LQSLACGKARVIHKVPKSKDVEDGDKFSCNDDFKHKLFRIKINQIQMKETVEEQASTTER
VYQDRQYQIDAAIVRIMKMRKTLSHNLLVSEVYNQLKFPVKPADLKKRIESLIDRDYMER
DKENPNQYNYVA
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
atggaatcgcatgtagaaggtttaccttcccctaatcccccaccgccaacccaagagggt
agaccaacagcttcagatgtaaataacgacagcagtagtaccacgaattcgaagaagagg
aaaataaaccgttctgagagggaagacattgattcaatatcgtcatctcctaaaacccac
agttcctcttcgtcctccacttcgcaacaaatccagaagaagttgaggttcggagattca
gtagatttcataggactggatgtgaaaatggctgaggagtcgtcatctgcatcgtgttct
aacaacacgaaaacagtttttytggctggggttgttgggcatcatgcaaacgggctgacg
aaaactgcaggctccactaccttctccaacagcaaacctggagctgcaaagaaactagta
atcaagaactttaaagaaaaacccaaattgccagagaactacacacacgagacctggcaa
aaactaaaggaggcggtcgaggccattcaaaacagcacttcaatcaagtacaatcttgag
gaactctaccaggctgtcgagaacctctgctcccataagatatctgcsaggctctacaaa
cagctgcgggtggtttgtgaagaccacatcaaggcacaaatcgatcaattcagagaggat
gtactggacagtaccctcttcctgaagaaaatagacaactgttggcaagatcactgtaga
caaatgatcatgattagaagtatatttttgttcttggaccgcacctatgttttacaaaac
tcaatgctcccatcaatctgggacatgggcctagagttgtttaggttttacataatcagc
gacctgaaggtccagagcaagaccatctacggcatcctgctgctcatcgagagggagcgc
agcggmgagaccatcgaccgcagcctgctccggagcctactgagcatgctctctgacctg
cagatttatcaggactcctttgagcagcgctttctggaggagactaatcggctgtatgct
gctgagggacagagactgatgcaggagagagaggtcccagagtatctccatcacgtcaac
aaacgcttagaggaggaagcggacagagtcatcacgtatctagaccagagcacacaaaaa
cctctcattgccactgtggagaagcaactactgggtgaacatctcacttcaactctacag
aaaggcttgaatcacctgctagatgagaacagaatccaggacttgtgtcttctctatcag
cttttcagtcgcgtgagagggggcgtgctagtcctcctacagcattggatcgagtacatc
aaggcctttggaagtacgatcgtcattaaccctgagaaggacaagaccatggtacaggag
ctcctggacttcaaggacaaggtggaccacatcatcgacatctgcttcataaagaacgag
aagtttgtcaatgccatgaaggaggcttttgagaccttcatcaacaagagaccaaacaaa
cctgctgagctcatagcaaaacacgtggattcaaagcttagggcgggtaacaaggaggcg
acggacgaggagctggagaagatgttggacaagatcatgatcatcttccgattcatttat
ggcaaagatgtttttgaggccttytacaagaaagatctggccaagaggttgctggtggga
aagagtgcctcygtggatgctgagaagtctatgctgtcgaaactgaaacatgaatgtgga
gcagcattcaccagcaagctggaaggcatgttcaaggacatggagctttccaaggacatc
atggtgcagttcaaacagtgtcaaaacatccctggtaacattgagctgacggtgaacatc
ctcaccatgggmtactggcccacctacatcccaatggaggtccatctgcccgcagagatg
gtgcgactgcaggagattttcaagacgttttacctgggcaagcacagcggcaggaagcta
cagtggcagtcgacgttaggccattgtgttttaaaagctgaatttaaagagggcaaaaaa
gagcttcaggtgtccctgtttcagacgctagtgctgctcatgttcaacgaaggagaggaa
ctcaccttggaggagatcaagctagctacaggaatagaggacggcgagctgcgacggacc
ctgcagtcgttggcgtgtggcaaggcacgggtcatccacaaagtccccaagagcaaagat
gtggaggacggagacaagttctcctgcaacgatgacttcaaacacaaactcttcaggatc
aagatcaaccagatccagatgaaagaaacggtggaagagcaagccagcaccacggaacga
gtctaccaggaccggcagtatcagatcgacgccgccatcgtccggatcatgaagatgagg
aaractctgagccataatctcttggtgtcggaagtgtacaaccaactcaagttccccgtc
aagcctgctgacctaaagaagagaatagagtctctcattgacagagattacatggagcgc
gacaaggagaaccccaaccaatacaactatgtggcttaa
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