Salvelinus sp. IW2-2015 (Arctic char): 111967699
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Entry
111967699 CDS
T05762
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 5
KO
K14435
chromodomain-helicase-DNA-binding protein 5 [EC:5.6.2.-]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
salp03036
]
111967699
Chromosome and associated proteins [BR:
salp03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
111967699
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
DUF1087
PHD
Chromo
ResIII
HDA2-3
PHD-1st_NSD
PHDvar_NSD
HTH_Hrp3
DEAD
PHD_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
111967699
NCBI-ProteinID:
XP_023848727
LinkDB
All DBs
Position
LG1:40888715..40951132
Genome browser
AA seq
2039 aa
AA seq
DB search
MPGSLSNEDEGQDDMDFEDEIPDEDEEGEHNTVPLTPLDSFFSDDDSLKQQKKKKPKKMK
EGKMPKVKKRKKEGGGGGGIGVGGNDLEEQASEREDDHPLQRPEIGSESESSTYAPTTKK
KKKKPKEKKEKKPKRKKREEEEEDDDDDDDDDDDDDDDDDNNKEPKSSSQLMQEWGLEDV
QYGFTEEDYRTLTNYKAFSQFLRPLIAKKNPKIPMSKMMTVLGSKWREFSANNPFKGTSA
TAVAAAVAAAVEMVTVASPISVKEVTTLPSSQPGPIRKAKTKDGKGPGVRRKTKTVKEVK
KKSKGKKTKSKKKASSSEEDFGLEESDFDDVSIHSASVRSDTSGNAKKKKARKGRKKRKR
EDGDGYETDHQDYCEVCQQGGEIILCDTCPKAYHLVCLDPELEKAPEGKWSCPHCEKEGI
QWEAKDDDDDEEEVAVEEEDDHLEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNG
EWLCPRCMCPPLKGKVQRILHWTWGDPPLPMEVPPGPDGEMVDPLVKPPLKGHPERELFV
KWAGLSYWHCSWVSELQLELYHAVMYRNYQRKNDMDEPPPYDYGSGEEELNNEKRKSKDP
QYAAMEERFYRYGIKPEWMVIHRILNHSYDKDGDVHYMIKWRDLPYDQCTWEVDDFDVPE
YNHSKHSYWDHREQMIGDDQRPLVVRKGKKGKEEEKRREREIPPDAPIIDPTIKFEHQPW
YINATGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEGHSKGP
YLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKDSRAVIRENEFTFEDSTVKTGRKVFRM
KKDSAIKFHVLLTSYELITIDQTILGSINWACLVVDEAHRLKNNQSKFFRILNGYKIYYK
LLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHMLRR
LKADVFKNMPSKTELIVRVELSPMQKKYYKFILTRNFEALNSKGGGNQVSLLNIMMDLKK
CCNHPYLFPVAAMEAPVLPNGSYDGNQLVKSSGKLTLLQKMLKKLKDEGHRVLIFSQMTK
MLDLLEDFLEYEGYKYERIDGSITGGLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLAT
ADTVVIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKRKMMLTHL
VVRPGLGSKTGSMSKQELDDILKFGTEELFKDEMEAAARAMGSHQKLWDIKDGDEGSVIH
YDDNAISKLLDRSQNATEDTEIQNMNEYLSSFKVAQYVVKDEDVEEEPQREIIKQEENVD
PDYWEKLLRHHYEQQQEDLARNLGKGKRIRKQVNYNDTSQEDQEWQDDLSDNHSEYSVGS
EDEDEDFEERPEGGRRHSRRQLKSDRDKPLPPLLARVGGNIEVLGFNTRQRKAFLNAIMR
WGMPPQDAFNSHWLVRDLRGKSEKEFRAYVSLFMRHLCEPGADGAETFADGVPREGLSRQ
HVLTRIGVMSLVRKKVQEFEHVNGKYSTPDLIPLGLELKKLTESLSSDPNTPVPASPAAT
PQPPGTPIPPEKMDSISGPTEDKETTELEYKKLPELETNLSTESSSQVEKTDKAADSDET
VKGSTEDKPVSSEEGSERTDTPSTLPEPSTNPKEPPSKQTELSSNQSSPKAEPCRETEKS
LDKGDSDPAPAKPEEKELKPVVSDEAKSEDLLVPDGRLNGEKEAQEEMEEVRRELLEKNG
FKMRFMFNIADGGFTELHTLWQNEERAAVSSGKMYDIWHRRHDYWLLAGIVTHGYARWQD
IQNDPRYAIHNEPFKTEMHKGNYLEMKNKFLARRFKLLEQALVIEEQLRRAAYLNMTQDP
SHPAMALNTRFAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTRL
PNMLSRIPPVSSRLQMSERSILSRLTSRGNEPPPQQPFGQSSFACSQMYSTGFGGSFRGP
AGEAMVNYSQMPLGPYVSVSNGPPPPSSHLDKKSCDPLRDVTTPDLKSGKPSDVICIED
NT seq
6120 nt
NT seq
+upstream
nt +downstream
nt
atgcctgggtcgttaagcaatgaagacgagggacaagacgacatggattttgaagacgag
ataccagatgaggatgaggagggtgaacacaacactgtcccgctcacacctctggacagc
ttcttctctgacgacgactccctcaaacaacagaagaagaagaaacctaaaaagatgaag
gagggcaagatgcccaaagtcaagaagaggaaaaaggagggaggaggaggtggtggaata
ggagttggtggcaatgacctggaggagcaggcctcagagcgggaggatgaccatccactg
caacgtccagagattggctccgagagcgagagcagcacctacgcccccaccacaaagaag
aagaagaagaaacccaaggagaagaaagagaagaaacccaaacggaagaagagagaagag
gaggaggaggacgatgacgatgatgacgacgacgacgacgacgatgatgatgatgatgat
aataataaggagcccaagtcatccagccagctgatgcaggagtggggtctggaagatgtg
cagtatggcttcacagaggaggactatagaaccctcaccaactacaaggctttcagccag
ttcctcaggccacttattgccaagaagaaccctaagatccccatgtcaaagatgatgaca
gtgttagggtccaagtggcgcgagttcagcgccaacaaccccttcaaaggcacctccgca
accgctgtggctgccgcggtggctgctgctgtggaaatggtcactgtggcctcgcccatc
tctgtcaaagaggtcactaccctaccaagctctcagcctgggccaatcagaaaagccaaa
accaaagatggaaaggggcctggggtaagacggaaaacaaagactgtaaaggaggtgaag
aagaaaagtaaagggaagaagaccaaatcaaagaagaaagcatcctcgagtgaggaggac
tttgggctggaggagtcggactttgatgatgtcagcatccacagtgcctcggtgcgctct
gatacctcggggaatgccaagaagaaaaaagcccggaagggtcggaaaaaaaggaaaaga
gaggatggggacggctatgagacagaccaccaggactactgtgaggtgtgccagcaggga
ggggagatcatcctgtgtgacacctgtcccaaagcttaccacctggtgtgtctggacccc
gagctggagaaggcccccgagggcaagtggagctgcccccactgtgagaaggagggcatc
cagtgggaggccaaagatgatgatgatgatgaggaggaggttgcggttgaggaagaggat
gaccacctggagttctgcagagtgtgtaaagatggaggggagctgctgtgctgtgacacc
tgcccctcctcctaccatatccactgcctcaaccctcccctgcctgagatacccaatggg
gagtggctgtgcccacgctgcatgtgcccacctctgaaggggaaggtacagaggattctc
cactggacttggggggatccccccttacccatggaggtgccccctggccctgatggagag
atggtggacccgctggtcaagccccccctgaagggccacccggagagggagctgtttgtc
aagtgggctggtctctcctactggcactgctcctgggtcagcgaactacagttagagctg
taccacgcggtgatgtaccgtaactaccagcggaagaacgacatggacgagccccctcca
tacgactacggctctggggaggaggagctgaacaacgagaagaggaagagtaaagacccg
cagtacgctgccatggaggagagattctaccgctacggcatcaagccagagtggatggtc
atccacaggatcctcaaccacagttatgataaggatggagatgtgcactacatgatcaag
tggagagacctgccctatgaccagtgcacctgggaggtggatgactttgacgtccctgag
tataaccacagcaaacactcctactgggaccacagggagcagatgattggtgatgaccag
cgccccttagtggtgagaaagggaaagaagggtaaagaggaggagaagaggagggagaga
gaaatcccccctgatgccccaattatagatcctaccatcaagtttgaacatcaaccctgg
tacatcaatgccactgggggcaccctgcatccgtaccagctggagggtctgaactggtta
cggttctcctgggcacagggcacagacactatcctggcagacgagatgggcctgggcaag
actgtccagaccatcgtgttcctctactcactctacaaggagggtcactccaaagggcca
tacctggtcagtgctcccctgtccaccatcatcaactgggagagggagtttgagatgtgg
gccccagacttctacgtggtcacttacactggggacaaagatagccgagcggtcatcagg
gagaacgagttcacttttgaggacagtacagtcaagacaggccgcaaggtcttccgtatg
aagaaagacagtgccatcaagttccatgtgttgttgacatcatatgagctgattaccatt
gatcagaccattctgggctccattaactgggcctgtctagtggtggacgaggcccacaga
ctgaagaacaaccagtcaaagtttttcagaatcctcaacggttataagatctactataag
ctgctactgactggcactcctctgcagaacaacctggaggagctgtttcacctgctcaac
ttcctcaccccagagagatttaataacctggagggctttctggaggagtttgcagacatc
tccaaggaggaccagatcaagaagctgcatgacctgctgggcccacacatgctcaggaga
ctgaaggctgatgtcttcaagaacatgccttccaagacagagctcattgtacgagtggag
ctcagccccatgcagaagaagtactacaagtttatcctgacacggaactttgaggcgctc
aactccaaaggcgggggcaaccaggtgtcccttctcaacatcatgatggacctgaagaag
tgttgcaaccacccctacctgttcccagtggcagccatggaggcgccagtgttacccaat
ggctcttatgatgggaaccagctggtcaagtcctcaggcaaactcaccctgctccagaag
atgctgaagaaactcaaagatgaaggacacagagttctcatcttctcccagatgactaag
atgctggatctgcttgaggattttctggaatacgagggctacaaatatgaacgcatcgac
ggaagcatcacaggggggctacgacaggaggctatcgaccgcttcaatgcaccgggtgca
cagcagttctgcttcctgctctccacccgagcgggaggcctgggcatcaacctagccacg
gcagacactgtcgtcatctacgactcagactggaaccctcacaatgatatccaggcattc
agcagggcccaccgtataggtcagaacaagaaggtgatgatctatcgcttcgtgacacgg
gccagcgtggaggagcgcatcacccaggtggccaagaggaagatgatgttgacccacctt
gtggtgaggcccggcctgggctccaagaccggctccatgtccaaacaggagctggacgac
atcctcaaatttggcactgaggagctcttcaaggatgagatggaggcggccgctcgggcc
atgggttcccaccagaaactgtgggacataaaggatggagatgagggcagtgtcattcac
tatgatgacaatgccatctccaagctgctggaccgtagccagaatgctacggaggacact
gagatccagaacatgaacgaatacctcagctccttcaaggtggcccagtatgttgtcaaa
gacgaggacgttgaggaggagccccagcgggagatcattaagcaggaggagaatgtggat
ccagactactgggagaagctgctgaggcaccactatgagcagcagcaggaggacctggcc
cgcaacctgggcaaaggcaaacgcatccgcaagcaggtcaactacaacgacacgtctcag
gaggaccaagagtggcaggatgatctttcagacaatcattccgagtactccgtggggtcc
gaggacgaggacgaagatttcgaggagaggccggaaggtgggcgcaggcactctcgcaga
cagctgaagagtgacagggacaaacctctgccacccctgctggcacgcgtagggggcaac
atcgaggtgctggggttcaacacccgtcagcggaaggccttcctcaatgctatcatgcgc
tggggcatgcctcctcaggacgccttcaactctcactggctggtcagagacctgagaggg
aagagtgagaaagagtttagggcctatgtgtccctgttcatgagacatctttgtgagccg
ggggcagacggggcggagacctttgcagacggtgtcccacgagaggggctgtctcgccaa
catgtcctcaccaggatcggagttatgtctctggtcaggaaaaaggtccaggagtttgag
catgtcaatggaaagtacagcactccagacctgatcccacttggactagagttgaagaaa
ctgactgagagtctgtcctctgaccccaacacccctgtccctgccagccctgcagccaca
ccccagcctcctggcactcctatcccaccagagaagatggactcaatctcagggcctact
gaagacaaggagaccacagaattagagtacaagaagctaccagaactggagactaatcta
agtacagagtcatcttcccaggtagagaagacagacaaggctgctgacagtgatgagaca
gtgaagggcagtacagaggacaaaccagtctcctcagaggagggtagtgaaaggacagac
acaccctccacacttccagagccatccaccaatcctaaagagcctccatccaaacagaca
gagctgtcgtccaatcaaagctcaccaaaagcggagccttgtagagagacagagaagtct
ttagataaaggagacagtgatcctgccccagccaaacctgaggagaaggaactgaagcca
gttgtttcagacgaggccaagagcgaggacttgctcgtgcccgacggacggctgaatgga
gaaaaagaagcacaggaggagatggaggaggtcaggagggaattactggagaagaatggt
ttcaagatgaggttcatgttcaacattgccgacggaggcttcacagagctgcacaccctg
tggcagaacgaggagcgggctgccgtgtcatctgggaagatgtatgacatctggcaccgt
cgccacgactactggctactggctggcatcgtaacacatggctatgcccgctggcaggac
attcagaacgatccacgctatgccatccacaatgagcccttcaagactgagatgcacaag
ggaaattacctggagatgaagaacaagttcctggctcgtcgctttaagctgttagagcag
gctctggtgatagaggagcagttgaggagggcagcgtacctgaatatgacccaggacccc
agccacccggccatggccctgaacactcgctttgctgaggtggagtgtctggcagagtct
caccagcacctgtccaaggagtctctggctggaaacaagccagccaacgccgtgctgcac
aaagtactgaaccagctggaggagctgctgagtgatatgaaggcagatgtgacgcggctt
cccaacatgttgtcccggatccccccagtgtcttcgcgtctgcagatgtctgagaggagc
atcctcagccgcctcaccagccgcggcaacgaacctccgccccaacagccgttcggccag
agctcatttgcctgttcccagatgtacagcactggctttgggggcagtttccgggggcct
gcaggtgaggccatggtcaactatagccagatgcccctgggaccctatgtcagtgtgtcc
aacggccccccacccccgtccagccacctggacaagaaatcctgcgacccgctgagggac
gtcaccacccctgacctcaagtcaggcaagcccagtgatgtcatctgtattgaagattag
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