Salvelinus sp. IW2-2015 (Arctic char): 111967701
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Entry
111967701 CDS
T05762
Name
(RefSeq) vesicle transport through interaction with t-SNAREs homolog 1A-like isoform X1
KO
K08493
vesicle transport through interaction with t-SNAREs 1
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
111967701
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
salp04131
]
111967701
Membrane trafficking [BR:
salp04131
]
SNARE
SNAP-25[N] (Qb)
Vti1
111967701
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Gene cluster
GFIT
Motif
Pfam:
V-SNARE
V-SNARE_C
Mer2
Sec20
Laminin_II
GTP-bdg_N
DUF5344
Motif
Other DBs
NCBI-GeneID:
111967701
NCBI-ProteinID:
XP_023848746
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All DBs
Position
LG8:complement(29402697..29570195)
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AA seq
224 aa
AA seq
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MSSDFEAYEQDFGTLTAEITNKIGRIPKLGAEEKTQLVLNVDKQLEEVRELMEQMDLEVR
EIPIQSRGMYQSRLKSYKGEMEKLEKDFKRSRIAYSDEVRNELLGEDAGSSESQLIKLRE
ERAHLLDNTEKLERSSRRLEAGYQIAVETEQVGQEILANLHSDREKIQRSRDRLRETDAN
LGKSSRILTGMLRRIIQNRVLVFVLGATILLTIILAIYFNVRGH
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcagactttgaagcctacgaacaggactttggaaccctgacagcagaaataaca
aacaaaattggaaggattcccaaattaggtgcagaggagaagacacagctggttctaaat
gtcgacaaacagcttgaagaagtcagagaattgatggagcagatggatctggaggtgcgt
gagatccccatccagagcagaggcatgtaccagagcagactgaagagctacaagggggag
atggagaagctggagaaagactttaaaaggtcacgtatcgcctacagtgatgaggtgcgg
aacgagctcctgggggaagacgctggctcctcggagagtcagttgataaagttacgtgaa
gagagagcacatctgttggacaacacagagaagctggaaaggtcatctcggaggctggaa
gctggctaccagatagcagtggaaaccgaacaagtgggacaagagatcctggctaactta
cacagtgaccgcgagaagatccagagatccagagatcggctgagagagaccgatgccaac
ctgggcaagagctcccgcatcctaacgggaatgctgagaagaatcatccagaaccgagtc
ctggtcttcgtccttggcgccaccatcctccttaccatcattctggccatctatttcaat
gtgcgagggcactga
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