Salvelinus sp. IW2-2015 (Arctic char): 111967707
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Entry
111967707 CDS
T05762
Name
(RefSeq) toll-like receptor 13
KO
K18808
toll-like receptor 13
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
salp04054
]
111967707
Pattern recognition receptors [BR:
salp04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
111967707
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
TIR
TIR_2
LRR_4
LRR_NXF1-5
LRR_LRWD1
LRR_9
Ost4
Motif
Other DBs
NCBI-GeneID:
111967707
NCBI-ProteinID:
XP_023848758
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Position
LG8:29802359..29805501
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AA seq
943 aa
AA seq
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MRLIRVTQFGVVALWIICVSSWTSEKCVMTDGFTDVWRGDDCHNGNLTVSCMDVDNVPLH
LAIFPISIQTLCVQMRNKSILHPNDFSRFDKLVALGISGQPAEILPGAFRGLFGLQTLSL
TCSLNLSIHSNTFKDLHNLKQLRIISCSFSVIALDAFDGMKQLTTLTIMQSQKKLLSDIK
SLSEVLCRIVNKTSSLTSLVLWAEIATLSSPKCIVSNGTTYETPSFYGLQDIVLNFPDLK
TVGKGVFEGFKNISFLNMPLNNVLQMQLLQSGVSKVETFQFWQEDSDLESMCEIVYQLST
SDVSITTDHINFSISAIQNCMTLRKLSLQRISISPRFIDLSFIHGLRNLQLLTVDQFSLN
NTRFTSLCKTPPSPILWLKIITLCFSSIFSIHRRQFFCMKNLEELNLKYNRISTIDNFAF
LGLQKLKVLNLGHNQLSEIKSFNFFDLHCLEYLNLEANPLVHIEALSFAHLSSIQNVFLG
DLNFPPESKIELNLTFVFGSIPRGLTYLYISSGRRPMTLIIGGDGAPNPGLGLHVHGETV
SFQDCERPFFRAVVELTARTEWILCGSIFAGSYFKFLQRFKLESKLSALFVDLTSLNTLV
HLRDLQLTGVDLNRQTGLAIMFHNLTRLETLMLLGCRIDYLEKDLSKDLQSLRELRLVIN
NELTIMEEFPEPLKSLKYLLIQDLLLQCSCNNAWFDNWAKRNRQVQVMFWHSTLGMKEIN
CIGEHGTQNFLKYSQIHCSMDVGFILFVSNTLGLLLFMLVVLLHHLAGQYLLALFYITRG
WLEEAVFRNNKRRYGYDAFVSYSGKDERWVVEELLPNMEQRGPPFLRLCLHSRDFQLGKD
IVDNITDCLYSSRRTVCLVSRHYLRSNWCSLEMKLATDRLRVEQRDILILVFLEDISPHQ
LSAHHRLARLVKTRTYLDWPKEPEQYQDFWDRLWATLAPKHGQ
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atgaggctcatcagagtcactcagtttggagttgtggctctttggatcatctgtgtctcc
agttggactagtgagaaatgcgtgatgactgatggttttacagatgtgtggagaggcgat
gattgtcacaatggtaaccttacagtgagctgcatggacgtcgacaatgtgccacttcac
ctagccattttccccatttccatccagaccttgtgtgtccagatgaggaacaaatccatt
ctgcatcccaacgatttctccagattcgacaaactggttgcgcttggcatctcaggtcaa
ccggcagagattcttccaggtgctttcagggggctatttggacttcagacactgagtctt
acttgctctttaaacttatccattcattcaaatacattcaaggatttacataatcttaaa
caattaagaataatttcatgttcgttttctgtaatagcactagatgcatttgatggaatg
aaacaattgaccactcttacgataatgcagtcccaaaaaaaattgttgtcagacataaag
agcttgtcagaggttttatgtagaatagttaataagacatcttcactgacatcgctggtc
ctgtgggctgaaattgccactctgagtagcccaaagtgtatcgtgtctaacgggactact
tatgagaccccaagtttctatggtcttcaagatattgtcttgaatttccctgatctaaag
accgtaggtaaaggtgtgtttgaaggttttaaaaacatttcatttcttaacatgccttta
aataatgtactgcagatgcaactactgcagtcgggtgtcagcaaagtggaaacatttcaa
ttctggcaggaggatagtgacttagagtcgatgtgtgaaattgtctatcaactttcaact
tctgatgtttcaataactacggatcatatcaacttctcaatttctgccattcaaaattgc
atgacacttcgaaaattgagccttcagagaatctctatttcaccaagatttattgatctg
agctttatccatggcttgaggaatctccagcttttgactgttgatcaattttccttgaac
aatacaagatttacatccctttgcaaaactccacctagtcctatattgtggttaaaaata
attacattgtgttttagtagtatttttagcatacatcgtagacagttcttttgcatgaaa
aacctggaagaacttaacttgaaatataatcgaatctccaccatcgacaactttgccttt
ctgggattgcagaagttaaaggttttaaatctaggtcataaccagttatctgaaatcaaa
tcatttaatttctttgatctgcactgcttagagtacctcaatttggaggcaaatccattg
gtgcacattgaagcattatcttttgctcaccttagttcaatacagaatgtgtttctggga
gacctgaacttccctccagaatcaaagattgagctgaatctgacatttgtatttggcagc
atacctcggggactgacatacctttacatcagctctggcagaaggcccatgactcttatt
attggtggcgatggtgccccaaacccaggcttgggcctgcatgtccacggcgagacagtg
tcttttcaggactgtgagaggcctttctttagggctgtcgttgagctaactgcaaggaca
gagtggatcctgtgtgggtccatctttgctgggagctacttcaagttccttcaacgcttc
aagctagaatcaaagctctcagctttatttgtggatctaaccagcctgaatacacttgtg
cacttgagggatttgcaacttacaggagtagacctcaatcggcagactggtcttgcgatc
atgtttcacaatttgaccagactggagactctgatgctccttggctgcaggatcgactac
cttgaaaaggacctgagcaaagacttacagtcattgagagaattacgtttggttattaac
aatgagcttacaatcatggaagaattccctgagcccctgaaaagcctaaagtatctgctt
atacaagatctacttttacaatgcagttgcaacaatgcttggtttgataactgggcgaaa
cgtaatcgacaagttcaggtcatgttttggcattctacattgggaatgaaggaaataaat
tgtataggtgagcatggcactcagaacttcctaaaatactcccaaatccattgttcaatg
gacgtaggattcattttgtttgtttccaacaccctgggtctcctgctcttcatgctggtg
gtgctgctacatcacctggctggccagtatctgctggctctattttacatcactcgcggc
tggttggaagaggccgtgtttcggaacaacaagagacgctatgggtacgacgcctttgtc
tcttacagtgggaaagacgagcgctgggtggtggaggagcttctgcccaacatggaacaa
cgaggtccccctttcctgcgcctgtgtctgcacagtagagacttccagctggggaaggac
attgtggacaacatcacagattgtctctacagcagccgccggactgtatgcttggtcagc
cgccactacctccgcagcaactggtgctctttggagatgaagctagccactgaccggctg
cgggtggagcaaagggatatcctcatcctggtcttcttggaagacatctctcctcaccag
ctgtctgcccaccacaggctggccagactggtgaagaccaggacctacctggactggcca
aaagagccagaacaataccaagatttttgggaccgactttgggctacgctggcgccaaaa
catggccagtga
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