Salvelinus sp. IW2-2015 (Arctic char): 111967727
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Entry
111967727 CDS
T05762
Symbol
vps35l
Name
(RefSeq) UPF0505 protein C16orf62 homolog
KO
K25731
VPS35 endosomal protein-sorting factor-like
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
salp04131
]
111967727 (vps35l)
Membrane trafficking [BR:
salp04131
]
Protein recycling
Others
Retriever complex
111967727 (vps35l)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
Motif
Other DBs
NCBI-GeneID:
111967727
NCBI-ProteinID:
XP_023848786
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Position
LG8:31341838..31356124
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AA seq
968 aa
AA seq
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MAAVQWHSRARRYESELQSCGLEVAPVEFSDYHPLKSITVTDSKSRRGARKGSTSSSSSS
SSSVAPDPLSSMLDGTDPLSMFAAASASESPLTLSQSSSTGDVGKGKRREKEDEVGVDFE
PWSSKRGEILARFTTTEKLSINLFMGSDKGKAPSLASSAVSEKVRTRLEELDDLEEGSQR
ELLNLSQQDYVNRIEELNQSLKEAWASDQKVKALKIVIQCSKLLSDTAVIQFYPSKFVLI
TDILDTFGRLVYERIWSMCSDPRPIPDSFTADEVNDTAKETCLNWFFKIASIRELIPRLY
VEVALLKCNRFLTKCGIQETVPRLTAMIRGIGDPLVAVYARAYLCRIGMEVAPHLKDSLN
KNFFDLLGTFRQIHGDSVQNQLVLQRVEIPVYLTLYSPAIHWILQCVSYRAPEALLTEMM
ERCKKLGNNALLLNSVMWAFRAEFIATRATDFIGMIKDCDEAGFPKHLLFGSLGRSLACA
DPPEAERLPILNEAWKVITKVRSPQDYINCAEIWVEFTCRHFTKREVNTVLSDIIKHMTP
DRAFEDAYPQLQSVIKKILTYFHDFSVLFSMERFLPFMDMFQKDSVRVEVCRSIMDVFIK
HQQEPTRDPVILNALLHVCKTMHDSVNALTLEDEKRSLALLINGFIRMVSFGRDFEQQLS
FCVEARATFCNLEPVLVQLIHTVNQLAMETRRVMSGSHSRKTAAFVRACAAYSFITIPSL
TSIFSRLNLYLLSGQVALANQCLSQADAFLKAAVSVLPEVPRSISIEGKLRSSEGFLLDF
INNFLSALLVVPDHPEAGVLFLVRGLLNMVQDYTWEDNSDAKVQVYISALPLLAAMSQES
YLYSIPKVDSNETLYGGDPKFLAEINKLCETLIGQVLDHLKTLGRDESVHRQGCLAFSLF
GCLLAHGDLRNNKLNQLAVNLWNLSHKQGYCNTRTSVRTLEFIKHQAQQPDMAHLSDMIQ
RLTLQSRT
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgtgcagtggcactctcgtgcacgcagatatgagtctgaactgcagagctgt
ggcctggaggtcgccccagtggagtttagcgactaccatcccctcaagtccatcactgtg
acagactccaagtcgcggaggggagcgcgtaaaggcagcacctcctcctcttcctcctct
tccagctccgtggcaccagatcccctgagctccatgctggatggaacggaccccctgtcc
atgtttgctgcagcctctgccagcgagtcccccctaaccctctcacagagcagctccact
ggggacgtgggtaaaggaaagaggagggagaaggaggatgaggttggagtggacttcgaa
ccgtggtcatccaaacggggagaaatccttgccaggttcactaccacggagaagctctcc
attaatctcttcatgggctcagataaaggcaaggctcccagtcttgcctcctctgctgta
tcggagaaggtgcgaactcgcctagaggagctggatgacctggaagaggggtctcagcgg
gagctgctgaatctgtcccagcaggactatgtgaaccgtatcgaggagctcaaccagtct
ctaaaagaggcctgggcctccgaccagaaggtcaaggccctcaagatcgtcatccagtgc
tccaagctgctgtcagacacagctgtgattcagttctacccaagcaagtttgtcctcatc
acagacattctggacacctttggacgtctggtgtatgagaggatctggtccatgtgttct
gaccctcgccccataccagactcctttacagctgatgaagtgaatgacacggccaaggag
acctgcctcaactggttcttcaaaattgcctccatcagagaactcatcccacgactatat
gtagaggtagctctactgaagtgtaaccgtttcttgaccaagtgtgggatccaggagacg
gtgcctcgcctcacagctatgatccgggggataggggaccccctggtggccgtgtatgcc
cgggcctacctctgtaggattgggatggaggtggctcctcacctgaaggacagcctgaac
aagaacttctttgacctgctggggacgttccgtcagatccacggcgacagtgtccagaac
cagctggtcctgcagagggtggagatccccgtctacctgaccctctactcccccgccatc
cactggatcctgcagtgtgtctcctacagagcaccagaggccctgctaacagagatgatg
gagaggtgcaaaaagcttgggaataatgccctgctgctgaactcggtgatgtgggcgttc
agggcggagtttatcgcgacgagagccaccgacttcatcggcatgatcaaggactgcgat
gaggcaggattccctaagcacctgttgtttggctctctgggccgcagtctggcctgtgct
gaccctcctgaggcagaaaggctgcccatcctcaatgaggcctggaaggtcatcaccaaa
gtgcgaagtccacaggattacatcaactgtgctgagatctgggtggagttcacctgtcgt
cacttcactaaacgtgaggtcaacactgtgctctctgacatcatcaagcacatgacccca
gaccgggcctttgaggatgcctatcctcagcttcagtccgtgataaagaagatcctcacc
tactttcatgacttctctgtcctcttctccatggagcgtttccttccgttcatggacatg
ttccagaaggacagcgtcagggtggaggtgtgtcgctccatcatggacgtcttcatcaaa
caccagcaggagcccactagagatcctgtcatcctcaatgctctactccacgtctgcaag
accatgcacgactctgtcaatgctctgacgctggaggacgagaagagatctctggcctta
ttgatcaatggcttcatacgcatggtgtcgtttggccgtgactttgagcagcagctgagt
ttctgtgtagaggcccgggccaccttctgtaacctggagccagtgctggtgcagctcatc
cacactgtgaaccagctggctatggagacgaggcgtgtgatgagcgggagccactcccgc
aagactgctgcttttgtcagggcatgtgctgcatacagcttcatcaccattccctccctc
accagcatcttcagccgcctcaacctctatctgctgtctgggcaggtggccctggccaac
cagtgtctttcccaggcggatgcatttctgaaggcagcggtcagtgtgttgccagaggtg
ccacgcagtatcagtatcgagggcaaactgcgctcttctgagggcttcctgcttgacttc
atcaacaacttcctgtcagcactactagttgtgccggaccacccagaggcaggggtgttg
ttccttgtgcgtgggctgctcaacatggtgcaggactacacctgggaggacaacagtgac
gccaaggtccaagtctacatcagcgccctgccactactggctgccatgagtcaggagagc
tacctctattccatccccaaagtggactcgaatgaaaccctttatggaggagatcccaag
tttttggcagagatcaacaagttatgtgaaactctgattggacaagtgctggaccacctc
aagaccttgggtagagatgagagtgttcatagacagggttgtctggccttctctctgttt
ggctgcctcctagctcatggggacctacgcaacaacaaactcaaccagctggctgtcaac
ctgtggaatctgagccacaagcagggttactgcaacacacgcacctctgtgcggacacta
gagttcatcaagcaccaggcccagcagcccgacatggctcacctttcagacatgattcaa
cgcctcaccttgcagtccaggacctga
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