KEGG   Salvelinus sp. IW2-2015 (Arctic char): 111967730
Entry
111967730         CDS       T05762                                 
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog
  KO
K15075  DNA repair/transcription protein MET18/MMS19
Organism
salp  Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:salp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:salp03036]
    111967730
   03400 DNA repair and recombination proteins [BR:salp03400]
    111967730
Chromosome and associated proteins [BR:salp03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    111967730
DNA repair and recombination proteins [BR:salp03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     111967730
SSDB
Motif
Pfam: MMS19_C MMS19_N TOR1L1_N HEAT_ECM29 Sec7-like_HUS Adaptin_N
Other DBs
NCBI-GeneID: 111967730
NCBI-ProteinID: XP_023848790
LinkDB
Position
LG8:31310605..31327273
AA seq 1024 aa
MMAADSALLLGLVEEFVLGQQDRKAVDTATELKAGQFTILQLVEALGLHLTSSQPQTRAR
GVQLLSNVLQECHGDLTEREVEVLIVFYENRLKDHYVITPHVIQGLKALTKCSVLPPGSA
VSILKSLFQDIHVQSLMLAERSCVYNILIRLMESRESELKGLGADFVYGFVQSVDGERDP
RNLLLAFHIARKIVHEGYDLGENTQELFEPCKCLFPIDFSPPPNDPHGITQEELVLALRA
VLTGTPRFAEFLLPLIIEKLDSDVQSAKVDSLQTLTACASVYEHKELAQFLPGLWASLRR
EVFQTASERVESAGLAAVGSLTACLSRSVLNSDSEDSLNVFLELVLKDCQHHLCEPDLKL
VWPSAKLLQATSTASYRASHRVAAAVLPSLIEQYNSRTQCAQRRTLLEVLQGFVHPGKSS
EEDESVLLDFRQSLCSIVFSALSESNADLQITSMRVLTALGQQTGLLLESDVELAVDHLT
RLILEEEDPKVSLAVVECAGALARLHPAAFISKMVPRLKEEIFSEPMAQGDSATPSQEHS
QQAVRQRCVAALAAVSSRPSLVQESTPVLLQVLTSAHTGTGAFSLEEVISVCHSLQKIAE
QAQDTEETGRVFHDIIPRLLGLALQAALQGSSDHRSPILEETVLSAMVPIISTTCARLQS
RLAVQTASRAVSLFLDGDVSFLPENAFPSQIQLLKAGDSRSQSQMVCLLMGCVCWLPRTV
EVPQMDRLLLELEELSCTCDHPLAYTSAAKCYAGLVNKSPAGEALDSLIDRMLKRISTEL
DSASSPVRXQAFTLLLWVSKALLLRYHPLSTALTDKLFSLLSDPELGSLAADGFSLLMSD
SPDVLNRGSHADVRIMYRQRFFAENSAKLVEGFNAVVQEKKSGYLKALSHIVNNLPRQVQ
LTELPALLPLLLEALSCPDQGVQVSTLSCLQPVLLDPPSALITQLEVLVGRTLALTTSPT
MKVRIASLRCIHALSRFPEHEIMPFRARVLRALAAPLDDHKRVVRREAAVARNEWFLLGS
PGGR
NT seq 3075 nt   +upstreamnt  +downstreamnt
atgatggctgcggatagtgccttgctattgggcttggtagaagaattcgttttgggacaa
caggaccgcaaggctgtagacaccgcaacagaactcaaggctggacagtttactatactg
cagttggttgaagccttgggtttgcatctgaccagctcccaaccccagacccgagcccgt
ggtgtccagctcctctccaatgtcctacaggagtgccatggagaccttacagagagagaa
gtggaagtccttatagtgttttatgagaacagattgaaggaccactatgtcatcacacca
catgtcatacaggggctgaaagcgctgaccaaatgctcagtgttgccgcctgggtccgca
gtgtccattctgaaatcactattccaggacatccatgtgcagtccctgatgctggcggag
cggtcgtgtgtttacaacatcctcatccggcttatggaatccagagagtcagagctgaag
ggcctgggtgcagactttgtctatgggtttgtccagtcagtggatggggagagggaccca
cgtaaccttctcctggccttccatatcgctagaaagattgtccatgaaggctatgatctt
ggtgagaacacgcaggagctgtttgaaccctgtaagtgtttgtttcctatagacttcagc
cctcccccgaacgacccccatggcatcacccaggaggagctggtcctggccctgagagcc
gtgctcaccggaacaccacgctttgcagagttcctgctgccactgatcattgagaagctg
gactccgatgttcagagtgccaaggtggactccctgcagaccctgactgcctgtgcttct
gtgtatgaacataaagagctagcccaattcctaccaggcctttgggcctcgctgcgcaga
gaggtgtttcagacagctagtgagcgggtggagtccgctggcctagccgctgtcggttcc
ctgacagcctgtctctcccgctccgtcctcaactccgactctgaagactccctcaatgtc
ttcctggagctggtcctcaaagactgtcagcaccacctgtgtgagccggacctgaagctg
gtgtggcccagtgcgaagctgctgcaggccacctctaccgcctcctacagggcgagccac
agagttgccgccgccgtcctgccgtccctcatagagcaatacaacagccgcacacagtgt
gctcagcggcgcaccctactggaggtgttacagggcttcgtccatccggggaagtcatca
gaagaggatgagagtgtgctgttggacttcaggcagtctctgtgcagtatagtgttctct
gctctgtctgagagcaacgctgacctccagatcacatctatgcgtgtgctcactgcgctg
ggccaacagacaggcctgctgttagagtcagatgtggagctggccgttgaccacctcacc
aggctcatcctggaggaggaagatcctaaagtcagcctggctgtggttgagtgtgcaggg
gctctggctcgcctgcaccctgcagccttcatctctaagatggttccacggctgaaggag
gagatcttctcagagcccatggcacaaggtgacagcgccacgccgtcccaggaacattcc
cagcaggcagtgcgtcagcgctgtgtggcggcgctggctgcggtgtcgtcccggcccagt
ttggttcaggagagcacacctgtcctgcttcaggtcctcacctctgcacacactggcact
ggcgcgttctcattggaagaggtgatctctgtctgccacagtctgcagaagatagcagag
caggcccaggacactgaagagaccggtcgcgtcttccatgacatcattcctcgcctgctc
ggactggcattgcaggcagctttgcagggttcctcagaccatcgtagcccgatactcgag
gagactgtcctatcagccatggtacccatcatcagcaccacctgtgcccgactacagtcc
cgactggctgtccaaacagcctcgcgggccgtgtccctcttccttgacggtgatgtttcc
ttcctgccagagaacgccttcccctcccagatccagctcctcaaggcaggtgactcgcgg
agccagtcccagatggtgtgcctgctcatgggttgtgtgtgctggctgccacggactgtg
gaggtgccccagatggacaggctactgttagagctggaggagctgagctgtacctgtgac
catcccctcgcctacacgtcagccgccaagtgctacgctgggctggtcaacaagagtccc
gcaggtgaagccctggactctctgatagacaggatgttgaagaggatctccactgagctg
gactctgcatcctccccagtcagaargcaggcgttcactctgctgctctgggtgtccaag
gctctcctccttcgctaccaccctctgtccacagccctgactgacaagctcttctccctg
ctcagtgacccagagctgggttcgttagcggccgatggattctctctcctgatgagcgac
tcgccggacgtcctgaaccgcggtagccacgccgacgtgcgcatcatgtaccgccagcgc
ttcttcgcggagaactctgccaaactggtcgagggcttcaacgctgtagtccaagagaag
aagtctggctacctgaaggcactgtctcacatagtgaacaacctacccagacaggtccag
cttactgagctaccagcgctcctgcccctcctgctggaggccctgtcgtgtccggaccag
ggggtgcaggtgtctaccctgtcctgcttgcaacctgtcctcctggaccccccttcagcc
ctcatcacccagctggaggtgctggtgggacgcactctagcgctcaccaccagcccgacc
atgaaagtgcggatagcctcactgcgctgtatccatgccctctcccgctttccagagcat
gagatcatgcccttccgtgcgagggtgctgcgcgccctagctgcccccctggatgaccac
aagagggtggtgaggagggaggcggcggtggcccggaatgaatggttccttctggggagt
ccaggaggcaggtga

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