Salvelinus sp. IW2-2015 (Arctic char): 111968038
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Entry
111968038 CDS
T05762
Symbol
lrpprc
Name
(RefSeq) leucine-rich PPR motif-containing protein, mitochondrial
KO
K17964
leucine-rich PPR motif-containing protein, mitochondrial
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
salp03029
]
111968038 (lrpprc)
Mitochondrial biogenesis [BR:
salp03029
]
Mitochondrial quality control factors
Mitochondrial respiratory chain complex assembly factors
Complex-IV assembly factors
111968038 (lrpprc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PPR_2
TPR_24
PPR
PPR_long
PPR_3
PPR_1
TPR_MalT
ARM_TT21
Unstab_antitox
Motif
Other DBs
NCBI-GeneID:
111968038
NCBI-ProteinID:
XP_023849326
LinkDB
All DBs
Position
LG8:complement(46064006..46135262)
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AA seq
1455 aa
AA seq
DB search
MPFHSSHFRLNMAALLRSARLLKCSPSGFLQRTGTNRNGPQLSRLYSGTIGGKGSGVCSR
QIVPGPYSVHRCAWPYAGVRHYAMVTEQRGLPTDESSLGVRSKQAQQFDWALAKLDSSVR
RTGRITKTLLLRIFHDICRTGYPSGNQALLLLRSCGSLLPEMPLAERTELAHRIWDKLQE
LGASYDASHYNALLKVYLQNEFKFSPTEFLAKMEAAGVQPNRVTFQRLIAAYCHDGDIEG
ASTILGFMKSKDLPITEAVFNALVTGHARAGDMESSESILQVMKGAGIEPGPDTYVALLN
AYAEKGDMDKIKQTLEAVENTDTSLMDRDLMQVVFSLSKAGHQQHVPEIVERMRHERGYV
PDAMNLCLSLITQGQEDTAFTVLKTFPTLQQETQSGDSPTLGNFFLRHCVNMDKPVDKMA
RYCKELQDSSYHTTPLQFTLYCCLEAKKTATAVEVMKMMKEQGQPIRPHYFWPLLTQHAK
DQNTTGIMEVLKGMQEVDVPADVETMSFYVLPAFPNIDAARDAFKEMGCSLESEGFLSSE
MRSKAGSGNLAGLLVMMSAPSFPALDLSTFRGSLIQGFRRSDDLESMAKITELLYKDDRF
SQGATGSAEAVSYFLYNLMDSMTEAEVQAQEDKLRQYFNQLKSMGIIIPGNIYRGIRNLL
DSYHVPELIKDVIALVDSQEPLNFSDNRIVSLDGKVLVLESRLAELKADSKPVGATLKQL
ILTLCAEEKLDRALELKKQHEADMVAGSYATLIHLCCRHDNVEEALNLKRELSRKDSSVS
LDSSKYVALVKVLTKQGRLEEAVDMLKEMKEKEVVVRDTTVTLLFHVLNAAAMKGDVAAV
RRLQDTIFTLGLATPTANLCSPLVSAHLETKDLGGALEAAMECQKQYGQLPRIHDVICGL
VERGDTELLQKAMDFVSQERGEMTMLYDLFFAFMQTGRHREARKIIETPGLRARPGRLQW
YAEKCINGNQMESLESMVDMTAKLFECDRDELYHYVLRLCKDTNDWRKAEATWTKMQEEN
VIPRERTLRILADILKSNGQEVPFEVPEVWYEQAADREAQAETKPEGSKGKATKSASTQA
ATVENSPADYQFRLLTLCKKGKAKEAYDMLKDIDRKGVTLGPAPYDSLIRALLAEGSMED
AMVVKEIAVGRVPGFKLNDIANSLLIITQVKRGLAKDGMSTLKSMLQGDQVPSKLSVTRL
VQSLGSHGDVQGIQEVEVLMKGLGTPLNLSSMVFFNNTAMAHIKNGDLDSAVEGLEAIYT
QGAGPQGPAASMAFVFRKVLEENNGAALDKLSAMAERLANHFSSYRAASDLFLQLLEANM
VEDAKFMLARCNAVAEQKEILVSYMSRLAQKPGQVGKIKTLMTLIPDFTEKETLYPYLMK
CYGVDNDLVSAKALYQQMQTEGVEADELCLKRLAVLYRNAGETVPFTEPPETFKFYAEKL
KEKSKGSQPSTTVEE
NT seq
4368 nt
NT seq
+upstream
nt +downstream
nt
atgcccttccattcctcgcactttaggttaaacatggcagcactcttgagatctgcacga
cttctgaaatgttcgccttcgggctttcttcaaagaacagggacgaacagaaatggaccg
cagctcagtcgactgtacagtggaacgatcggtggtaaaggctccggagtctgttcaaga
caaatcgtcccaggcccatacagtgtacacaggtgtgcgtggccctatgcaggggtacgt
cactacgccatggtcacagagcagcgggggctacccactgatgagtccagtttgggtgtg
cgatctaagcaggcccagcagtttgactgggccctggcaaagcttgacagttcagtgagg
aggacgggacgcatcaccaagaccctgctgctgcgcatcttccacgacatctgccgaaca
ggctaccctagtgggaaccaggccctgctcctcctgcggagctgtggctctctactgcct
gagatgcccctggcggaacgcactgagctggcgcaccgaatctgggacaagctacaggaa
ctgggtgcctcatacgatgccagtcattacaacgcactgctcaaggtatacctgcagaac
gagttcaagttctcccccacagagttcttggccaagatggaggcagctggtgtgcagccc
aacagagtgaccttccagagactgattgcagcctactgccatgatggggacattgagggt
gccagtacaatcctgggtttcatgaagagcaaggacctgccaatcacagaggctgttttc
aacgccttagtgacaggtcatgcacgtgcaggtgacatggagagttcagagagcatcctg
caagtcatgaagggggcaggcatcgagccgggccctgacacatatgtggcactgctcaac
gcctatgcagagaaaggagatatggacaagatcaaacagactctggaggctgtggagaac
acagacaccagtctgatggacagagacctgatgcaggtggtattcagcttgtccaaggca
ggccatcagcagcacgtaccagagatagtggagcgtatgagacacgagagaggatatgta
ccagatgctatgaacttgtgtctgagcctgatcacccagggccaggaggacacagccttc
accgtgctgaagaccttccccaccctgcagcaagagacccagagtggagactcccccacc
ctgggcaacttcttcctgcgccactgtgtcaacatggacaagccagtggataagatggcg
cgctactgcaaagagctgcaggactctagctaccacactactcccctgcagttcaccctc
tactgctgcctggaggccaagaagactgctactgcagtggaggtgatgaagatgatgaag
gaacaggggcaacccatcagaccccactacttttggcccctcctcacacaacatgccaag
gaccagaacacaacagggatcatggaggtgttgaagggcatgcaggaagtggatgtacca
gctgatgtagagacaatgtccttctacgtcctgcctgctttcccgaacatagacgctgcc
cgggacgcattcaaggaaatgggctgctccttggagtctgagggtttcttgtcctctgag
atgcgctctaaggctggtagtgggaacctggcaggactgttggttatgatgtctgctccc
tccttccctgccctggacctgagtaccttcagaggaagtctcatccagggcttcagaagg
tctgacgatctggagagcatggccaagatcactgagctgctgtacaaagatgatcgtttc
tctcagggagctacaggatctgctgaggctgtgtcctactttctctataacctgatggac
agcatgactgaggcagaggtgcaggctcaggaggacaagctcaggcagtacttcaaccag
ctgaagagcatgggtatcatcatcccagggaacatctacagagggatcagaaacctgcta
gactcctatcacgtgcctgagctcatcaaggatgtcatcgccctggtggacagccaagaa
cctctgaacttctcagacaacagaatcgttagtctggatggcaaggttttggtgctggag
agcaggctggctgagctgaaggctgacagtaaaccagtaggagctaccctgaaacaactc
atcctcactctgtgtgccgaggagaaactggacagggctctggagctgaaaaaacaacac
gaggcagacatggttgccgggagctacgccaccctcatccacctctgctgtcgccatgac
aatgtggaagaggcgctgaacttgaaaagagagctgagccgtaaggattcctctgtgtct
ctggattccagcaagtacgtggctctagtcaaggtcctgaccaagcagggcagactggaa
gaggcggtggacatgctgaaggaaatgaaggagaaggaggtggttgtgagggacaccaca
gttaccctgctcttccacgtcctcaatgctgcggccatgaagggggacgtggcagctgtc
cgcaggctccaagacaccatcttcacccttggcctggccacgcccaccgccaacctctgc
tccccgctggtctcagcccacctggagactaaggaccttggcggggctctggaggcagct
atggagtgtcagaagcagtatggacaactcccacgtatacacgacgtcatctgtggcctg
gtggagaggggagacacggagctcctacagaaagcgatggactttgtgagccaggagcga
ggcgagatgacaatgctgtacgacctctttttcgccttcatgcagaccggccgccaccgg
gaggcccgcaaaatcattgagactccaggtttaagggctagaccaggacgccttcagtgg
tacgctgagaaatgcattaacggcaaccagatggagtctttggagagcatggtggatatg
acagccaagctgtttgaatgtgaccgagatgagctgtatcactacgtgttgcggctctgc
aaggacacaaacgactggcgcaaggcggaggccacctggaccaagatgcaggaggagaac
gtgataccaagagagaggaccctgcgcatactggctgacatactcaagagtaatggacag
gaggtgcctttcgaggtgcctgaggtgtggtatgagcaggctgcagacagagaagcacag
gcagagaccaagcctgaagggtcaaagggcaaagccaccaagtcagccagcacccaggct
gctactgtagagaacagccctgctgactaccagttcagactgctcaccctctgcaagaag
ggcaaggctaaagaggcctatgatatgctgaaggatattgataggaaaggtgtgaccctg
ggcccggccccctacgacagtctgatccgggctctgctggccgagggtagtatggaggac
gccatggtggtcaaagagattgccgtaggccgtgtcccagggttcaagctgaatgacata
gccaacagcctcctcatcattacacaggtcaagagagggctagccaaagatggcatgtcc
acactcaagtccatgctgcagggagaccaggtgccctcaaaactgtccgtcacacgattg
gtgcaatcccttggtagccatggggatgtccagggcatccaggaagtggaggttctgatg
aaggggttgggcacgcccctcaacctgtcaagcatggtctttttcaacaacactgccatg
gcacacatcaaaaatggagacctggactctgcagtggagggcttggaggctatctacaca
cagggtgctgggcctcagggtccggctgccagcatggcctttgtcttcaggaaggtgttg
gaggagaacaatggcgctgctctggataaattgagtgccatggcagagaggctggcaaat
cacttttcatcgtacagagctgcttcagacctcttcctacagctgctggaggctaacatg
gtagaggacgccaagttcatgctggcccgctgtaatgctgtggctgaacagaaggagatt
ctggtctcttacatgtccaggctggcccagaaaccaggccaggtgggcaagatcaagacc
ctgatgactctcatccctgacttcacagagaaggagacgttgtatccctacctgatgaag
tgctatggtgtggacaacgacctggtgtcggctaaagccctgtaccagcagatgcagacg
gagggagtggaggctgatgagctgtgtctgaagagacttgccgtgctgtacaggaacgca
ggagagaccgtcccctttactgagccacctgagacgtttaagttttatgcagaaaagctg
aaggagaaatccaagggatcgcagccaagcaccacagtggaggaataa
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