Salvelinus sp. IW2-2015 (Arctic char): 111968053
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Entry
111968053 CDS
T05762
Name
(RefSeq) lutropin-choriogonadotropic hormone receptor-like
KO
K04248
lutropin-choriogonadotropic hormone receptor
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04020
Calcium signaling pathway
salp04080
Neuroactive ligand-receptor interaction
salp04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
111968053
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
111968053
04081 Hormone signaling
111968053
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
salp04030
]
111968053
G protein-coupled receptors [BR:
salp04030
]
Rhodopsin family
Peptide
Lutropin-choriogonadotropic hormone
111968053
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
LRR_8
LRR_5
LRR_14
SPATA2_PUB-like
Motif
Other DBs
NCBI-GeneID:
111968053
NCBI-ProteinID:
XP_023849348
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Position
LG8:47143264..47166366
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AA seq
728 aa
AA seq
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MMSISLLFLFYPSVLLFFGFGCRYASSFVCPGICRCSSNTIRCNNITEKSVPMSERGPRL
VLKHLTMSTIASHTFDGLRRVQHIEIGQSVALETIETLAFNNLLDLNEIFIKNTRSLVHI
ARRTFNNLPKLRYLSISNTGITVFPDMTSIHSLEPWNQNFVLDICDNLYLLSIPVNAFVG
MTTEYTAMNLFNNGIREIQDYAFNGTKINKLVLKNNRNLKVIHREAFKGAVGPRILDVSS
TAIETLPSHGLNSVVELVARTAYGLKRLPPFRGLGNLQKAHLTYNSHCCALLTWDTHRDS
PINAAQHNGSRPTYCDDSPSEKFPAGMVDSSDTSLLVEIHGTNEDIEDESYGGVDFQYPE
LGLYCQTRPTLQCTPEADAFNPCEDIAGFSFLRVAIWFINILAIIGNLTVLLIFFTSRCK
LTVPRFLMCHLAFADFCIGVYLLMIAAVDLHTRGHYSEHAIDWQTGAGCSAAGFLSVFGG
ELSVYTLSTITLERWHTITHALQLEKRLGLAQAAGIMAGGWLICLGMAMLPLVGVSSYSR
VSMCLPMDVKTPLAQAFILLLLLFNVGAFLVVCVCYVLIYLAVRNPQFPSRSADAKIAKR
MAVLIFTDLLCMAPISFFAISAAFKVPLITVTNSKILLVLFFPINSCANPFLYAIFTKAF
RKDVYLLLSNMGCCENIANMYRMKAYCSENLVKSSSENKGTLICTTLRMDPLPLQSQQLK
DDGDLGTI
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcgatatcgctgttgttcctgttctacccgtctgttttgctcttctttggcttt
ggctgccggtacgcttcgagctttgtgtgtccggggatctgccgatgttcctccaacaca
attagatgtaacaacatcacggagaagtccgttccaatgagcgaaaggggtccaagactg
gtcctgaagcatctgactatgagcactatagccagccacacctttgatggcctgagaaga
gtccagcatatagaaatcggtcaaagtgttgccttggaaactatagagacccttgccttc
aacaatcttctcgacctcaatgaaatcttcattaagaacacacggagcctggtgcacatc
gctcgaaggacgttcaacaaccttcctaagctgcgttatctgagtatatccaacactggg
ataacagtgtttcctgacatgacttctatccattctctggaaccttggaaccaaaatttt
gtcttggatatctgtgacaacctctatcttctatcaataccagtaaatgctttcgttggc
atgacaactgaatatactgcaatgaacctgttcaacaacggcattagagaaatacaagac
tatgcctttaatgggaccaagataaataaattggttttaaagaataaccgaaacctcaaa
gtgatccatagggaagcttttaaaggagcggtgggccctaggatactagatgtctcgtcg
acggcgatagagactttgccatcccatggcctcaattctgtcgtggagctggttgcccgt
acagcctacggcctaaagagactaccccctttcaggggtctgggcaacctgcagaaagca
cacctcacctacaacagccactgctgtgccttactcacctgggacacacacagggattct
ccaatcaacgcagcacaacataatggatctaggcctacgtattgtgatgacagtccgtct
gaaaagtttccagctggtatggtggactcatccgacacatccctactggtggaaatacat
ggaacaaatgaagatatcgaagatgagtcctacggaggtgtggatttccagtatccagaa
ctagggttatactgtcagaccagaccaaccctccagtgtacaccagaggctgacgccttt
aacccgtgtgaagacatagcaggtttcagttttctcagagtcgccatctggttcatcaac
atcctggcgatcattggcaacctgacggtcctcctcatcttcttcaccagccgctgtaaa
ctcaccgtgccacgcttcctcatgtgtcacctggccttcgctgacttctgcatcggcgtc
tacctccttatgatcgccgcggtcgacctccacacccgaggccactacagtgagcacgcc
atcgattggcagacgggagcaggttgtagtgcggcgggcttcctgtctgtgttcggtggg
gagctgtcggtttacacgttgtcgactatcactctggagcgctggcatacgataactcat
gccttgcagctggagaagaggctaggcctggcgcaggctgctggcatcatggctggaggg
tggttgatctgtctggggatggccatgctccccctggtgggggtcagcagctacagcagg
gtgagcatgtgccttcccatggacgtaaagactcctctggcccaggctttcatcctcctg
ctcctcctcttcaacgtgggggcgttcctggtggtctgcgtctgctacgtcctcatctac
ctggcagtacggaacccccagttccccagccgcagtgcagacgccaagatcgctaaacgc
atggctgtcctcatcttcaccgacctcctctgcatggcacccatctcgttcttcgctata
tccgcagcctttaaggttccgctcatcaccgtcaccaactccaagatactcctggtgttg
ttctttcctatcaattcctgtgccaaccctttcctctatgccatctttactaaggctttc
aggaaagatgtttatctgttactgagtaacatgggctgctgcgagaatatagctaatatg
tacaggatgaaggcctattgctctgagaatttggtgaagagtagttctgagaacaaaggg
actctgatttgcacaacactaaggatggaccctctgccattgcagagccaacagctgaaa
gatgatggagatttggggacaatctga
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