Salvelinus sp. IW2-2015 (Arctic char): 111968072
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Entry
111968072 CDS
T05762
Symbol
thbs2
Name
(RefSeq) LOW QUALITY PROTEIN: thrombospondin-2
KO
K04659
thrombospondin 2/3/4/5
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04145
Phagosome
salp04510
Focal adhesion
salp04512
ECM-receptor interaction
salp04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
111968072 (thbs2)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
111968072 (thbs2)
09144 Cellular community - eukaryotes
04510 Focal adhesion
111968072 (thbs2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
111968072 (thbs2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
salp04131
]
111968072 (thbs2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
salp04147
]
111968072 (thbs2)
00536 Glycosaminoglycan binding proteins [BR:
salp00536
]
111968072 (thbs2)
Membrane trafficking [BR:
salp04131
]
Endocytosis
Phagocytosis
Opsonins
111968072 (thbs2)
Exosome [BR:
salp04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
111968072 (thbs2)
Exosomal proteins of colorectal cancer cells
111968072 (thbs2)
Exosomal proteins of bladder cancer cells
111968072 (thbs2)
Glycosaminoglycan binding proteins [BR:
salp00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
111968072 (thbs2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
TSP_1
TSP1_spondin
VWC
EGF_3
TSP1_ADAMTS
TSP1_CCN
cEGF
Laminin_G_3
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
111968072
NCBI-ProteinID:
XP_023849371
LinkDB
All DBs
Position
LG8:50064164..50098460
Genome browser
AA seq
1207 aa
AA seq
DB search
MVTAALTGGFALSPGDMILRRSLNLLPILLLCSSALPQDGEVTMDDDTTFDLFDISGITR
KTLGAKQFRGQDTDNPAYRFIRFDHLPSVSAPVLKQMLLQIQNNEGFVFVASMRQDRGSR
GTLIALEGANGQRQFEIVSNGRANTLDLVYWVDGSQNVVSFEDVDLSDSQWKNITLHVHG
ENANLFVGCSLIDSFILDEPFYEHLQAEDSRMFVAKGSIRENHFRGLLQNVRFMFDTSVD
DVLRNKGCEVTKADEANVVVSESTDMEGVSPSTAITTNFIGQKTEKLGADMCERSCEELS
TMFQELKGLRVVVGNLIDGLQKVTEENTVMKDALGKMKNSKEKHMCWQDGRLFEDKEDWV
VDSCTTCTCQDSKIVCHQITCPPVACASPSFIDGECCPVCLSKDSEDGWSPWSEWTECTV
TCGTGTQQRGRSCDATSNTCSGPSIQTRKCSLGKCDSRVRQNGGWSLWSPWSSCSVTCGE
GQITRIRHCNAPTPQLGGKDCEGQGRETQRCEAKPCPIDGGWGPWSPWAICSATCGGGFK
GRTRVCNSPEPQYGGKKCPGETNDRDACNKQECPIDGCLSNPCFGGVDCNSAPDGSWECG
PCPLGFRGNGTHCEDVNECDMVSDICFKAGGASRCINTDPGFHCLSCPPRYKGTQPFGMG
VEAAKKNKQVCEPENPCKDKTHNCHRSSECIYISHFSDPXYKCECRXGYAGDGFICGEDX
DLDGWPNQELVCGANATYHCKKDNCPNLPNSGQEDFDKDGQGDACRQDDDNDGIVDERDN
CPLLYNPRQFDLMQDDVGDRCDNCPYEHNPAQIDTDHNGEGDACAVDIDGDEILNEQDNC
PYLYNNDQKDTDMDGVGDQCDNCPLLHNPDQADTDNELVGDQCDNNQDIDEDGHQNNLDN
CPYVANSNQADHDKDGKGDACDFDDDNDGIPDDRDNCRLTPNKDQLDSDGDGRGDACKDD
FDNDNIPDFLDVCPENNAVSVTNFRKFQMVHLDPKGTTQIDPNWVVRHQGKELVQTVNSD
PGIAVGFDEFNAVDFSGTFYVNTDRDDDYAGFVFGYQSSGRFYVVMWKQITQTYWEDKPS
KAFGISGVSLKVVNSTTGTGENLRNALWHTGNTKNQVRTLWHDPKNIGWKDYTAYRWHLI
HRPKTGFIRVVVYEGKQILADSGPVYDKTFAGGRLGLFVFSQELVFFSDLKYECRDKLEF
PTVLSIR
NT seq
3624 nt
NT seq
+upstream
nt +downstream
nt
atggtaactgccgctctaacagggggatttgcactttcaccaggagatatgatactcagg
agaagtctcaacctgctgcccattttattactttgctcctcagcgctacctcaagatggt
gaggttacaatggatgacgacacaacgtttgacctgtttgatattagcggtatcacgcgc
aagactctgggcgccaagcaattccgcggccaagacacggacaaccccgcttaccgcttc
atccgcttcgaccatttgccctctgtgagcgcgcccgtgctcaaacagatgcttctgcaa
atccagaacaacgagggcttcgtgttcgtggccagcatgcgccaggaccgcggctcgcgg
ggaaccctcatcgcattggaaggcgccaacggccagcggcagtttgaaatcgtctccaac
ggtcgtgccaacacgctggaccttgtctactgggtggacggctctcaaaatgttgtctcc
ttcgaggatgttgacctgtctgactcgcagtggaagaatatcacacttcatgttcatggc
gaaaatgcaaatctgtttgtgggctgcagtctcatcgacagcttcatcttggatgagcct
ttctacgagcacctgcaggcagaggatagccgaatgttcgtcgccaagggatccatccgc
gaaaaccacttcaggggcttactgcagaatgttcgcttcatgttcgacacatccgtggat
gatgttctgaggaacaaaggctgtgaagtcactaaggctgacgaggccaacgtggtggtg
agtgagagcacagatatggagggtgttagtccctccacagccatcaccactaacttcatc
ggccaaaagacagagaagctgggagcagatatgtgtgaacgatcctgtgaggaactcagc
accatgttccaggagctcaaaggactgcgggttgtagtggggaacctcattgacggcctg
cagaaagtgacagaggagaacacagtaatgaaggatgctttggggaagatgaagaactcc
aaggagaaacacatgtgttggcaggacggacggctgtttgaagataaggaggactgggtg
gtggacagctgcaccacgtgtacctgtcaggactcaaagatcgtgtgtcaccaaatcact
tgtcctcctgtggcctgtgctagcccctccttcatcgacggagagtgttgccctgtgtgt
ctgtctaaggacagtgaggacggctggtccccctggtcggagtggacagagtgtactgtc
acctgtgggacaggtactcaacagaggggacgctcatgtgatgccaccagtaacacctgc
tccggaccatccatccagaccaggaaatgcagcctgggaaaatgtgacagccgagttcgt
cagaacggtgggtggagcctgtggtctccctggtcatcatgctcagtgacgtgtggtgag
ggccagatcaccaggatacgccactgcaacgcacccacaccacaactggggggcaaggac
tgtgagggccaggggagagagacacagcgctgtgaggccaagccctgtcccattgacggt
ggttggggaccatggtcgccttgggcgatctgctcggcaacctgtgggggtggatttaag
ggtcggacccgtgtctgtaacagccccgaaccccagtacggaggcaagaagtgccccggg
gagaccaacgacagggatgcctgcaacaaacaagaatgccctatcgacggttgtctgtct
aacccatgcttcggaggagtggactgtaacagtgcccccgacggatcctgggagtgtggg
ccatgccctctcggtttccgcggcaatggaacccactgcgaagacgtcaacgagtgtgac
atggtgtctgacatatgctttaaagctggtggagcatcgcgttgcatcaacacagaccca
gggttccactgtctgtcctgcccaccccgctacaagggaacgcagcccttcggcatgggg
gtggaagctgccaagaagaacaagcaggtctgcgagccagagaacccctgcaaagacaag
acccacaactgtcaccggtcctcagagtgtatctacatcagccactttagtgacccantg
tacaagtgtgagtgcagantcggctacgctggtgatggcttcatctgtggagaggatnca
gacctggatggatggcctaatcaagaactggtgtgtggtgccaacgccacctatcactgc
aaaaaggataactgccccaacctgcctaactctggacaggaagattttgacaaagacggt
cagggagacgcttgtcgacaggatgatgacaatgatggaatcgtggatgaaagagacaac
tgtcctctcctgtacaaccccagacagtttgacttgatgcaggatgatgtgggggatcgt
tgtgacaactgcccctacgaacacaaccctgcccagatcgacaccgaccacaacggggaa
ggtgacgcctgtgctgtcgacattgatggagatgaaatcctaaacgagcaagacaactgc
ccgtacttatacaacaatgaccagaaggacactgacatggatggagtcggtgaccagtgt
gacaactgtcctctgctacacaaccctgaccaggctgacacagacaatgarcttgtagga
gaccagtgtgacaacaaccaggatatcgatgaagacggtcaccagaataacctggacaac
tgtccttacgtcgccaactccaaccaggcagaccacgataaggacggcaagggggacgcc
tgtgacttcgacgatgacaatgacggtatccctgacgatagggacaactgtagattgaca
cccaacaaagatcaactggactctgatggcgacggtagaggcgacgcctgcaaagatgac
tttgacaacgacaacatcccggacttccttgacgtgtgtcctgagaacaatgccgtcagc
gtcacaaacttccggaagtttcagatggtgcacctggaccccaagggaaccacgcagatc
gaccccaactgggtggttaggcatcagggcaaggagctggtacagaccgtcaactctgac
cctggcatcgctgttggctttgatgagttcaacgcggtggacttcagtggtacgttctac
gtgaacacggaccgggatgacgactatgctggctttgtgttcggctaccagtcgagcggc
cgcttctacgtggtgatgtggaagcagatcactcagacctactgggaagacaaaccctcc
aaggcctttggtatctctggtgtctctctcaaggtggtcaactcaactacgggcacaggg
gagaacctgagaaacgccctgtggcacacaggcaacacaaaaaatcaggtgcgcactctg
tggcacgacccaaagaacattggctggaaggattacacagcctacaggtggcacctcatc
cacagacccaagactggattcatcagggttgtggtctatgaagggaaacagatcttggca
gactcaggaccagtgtacgacaagacgtttgctggaggacggttaggcctgtttgtcttc
tcccaggaactggtcttcttctctgatctcaaatatgagtgtagagataagctggagttt
ccaactgtgttgtccatcagataa
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integrated database retrieval system