Salvelinus sp. IW2-2015 (Arctic char): 111968127
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Entry
111968127 CDS
T05762
Name
(RefSeq) vacuolar protein sorting-associated protein 26A
KO
K18466
vacuolar protein sorting-associated protein 26A/B
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04142
Lysosome biogenesis
salp04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
111968127
04142 Lysosome biogenesis
111968127
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
salp04131
]
111968127
Membrane trafficking [BR:
salp04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Retromer subcomplex
111968127
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps26
Arrestin_N
Motif
Other DBs
NCBI-GeneID:
111968127
NCBI-ProteinID:
XP_023849457
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Position
LG8:52579382..52592066
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AA seq
327 aa
AA seq
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MSFLGGLFGPVCEIDVLLNDAETRKTAELKTEDGKVEKNYLFYDGESVSGKVNLNVRQTG
KRLEHQGIRIEFVGQIELFSDKSNTHEFVNLVKELALPGELTQNRSYDFEFTQVEKPYES
YVGTNVRLRYFLKVTVMRRLSDLVKEYELIVHQLATYPDVNNSIKMEVGIEDCLHIEFEY
NKSKYHLKDVIVGKIYFLLVRIKIQHMELQLIKKEMTGIGPSTTTETDTVAKYDIMDGAP
VKGESIPIRLFLAGYDLTATMRDVNKKFSVRYFLNLVLVDEEDRRYFKQQEVVLWRKAPE
KIRKRNFQRYESPEPRPTLTAEQQPEM
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgagtttcctgggtggtttatttggtcctgtgtgtgaaattgatgtcctactcaatgat
gcagagactaggaagaccgcagaactcaaaacagaggatggaaaagtggagaagaactac
cttttttatgatggagaatcagtctctgggaaggtgaatctcaatgtgaggcagacaggc
aagagactagaacaccaggggattcgaattgagtttgttgggcagattgagctcttcagt
gataaaagcaacacacatgagtttgtgaacctggtgaaggagcttgccctgccaggggag
ttgacccagaaccgaagctacgactttgagttcacgcaggtggagaagccctatgaatct
tacgttggaaccaatgttcgactgagatatttcctcaaagtgacagtaatgaggagactg
tctgatctggtgaaagagtatgagctcattgtccatcagctggctacttaccctgatgtg
aataattccattaaaatggaagttggcattgaagactgtctacacatagagtttgaatac
aacaagtccaaataccacctgaaagatgtcattgtgggtaaaatctatttccttctggtg
agaatcaaaatccagcacatggaacttcagttgataaagaaggagatgactggaataggg
cctagcacaactacagagacggacactgttgccaagtatgacataatggatggcgcccct
gtgaaaggagagtccattcccatccgtctgtttttggctggctacgacctgacagccacc
atgagggacgtcaacaagaagttctctgtgcggtacttcctcaacctggtgctggtggat
gaggaggacaggagatacttcaaacagcaggaggtcgttctctggaggaaagctcctgag
aaaataaggaaaaggaacttccaacgctacgagtcgccggagccacggccgacccttact
gctgagcagcaacccgaaatgtga
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