Salvelinus sp. IW2-2015 (Arctic char): 111968238
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Entry
111968238 CDS
T05762
Name
(RefSeq) LOW QUALITY PROTEIN: integrin beta-4
KO
K06525
integrin beta 4
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04382
Cornified envelope formation
salp04510
Focal adhesion
salp04512
ECM-receptor interaction
salp04518
Integrin signaling
salp04810
Regulation of actin cytoskeleton
salp04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
111968238
04518 Integrin signaling
111968238
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
111968238
09142 Cell motility
04820 Cytoskeleton in muscle cells
111968238
04810 Regulation of actin cytoskeleton
111968238
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
111968238
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
salp04147
]
111968238
04515 Cell adhesion molecules [BR:
salp04515
]
111968238
04090 CD molecules [BR:
salp04090
]
111968238
Exosome [BR:
salp04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
111968238
Exosomal proteins of bladder cancer cells
111968238
Cell adhesion molecules [BR:
salp04515
]
Integrins
Integrin beta subunits
111968238
CD molecules [BR:
salp04090
]
Proteins
111968238
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
Calx-beta
Pur_ac_phosph_N
Integrin_B_tail
FN3_DSCAM-DSCAML_C
Motif
Other DBs
NCBI-GeneID:
111968238
NCBI-ProteinID:
XP_023849554
LinkDB
All DBs
AA seq
1462 aa
AA seq
DB search
MKQINKQLLGELELVLDLRIRATPSSLVIRGVCNGRGVCKCGRCXCQDSGLAMTXTCEAN
FQAQLGMCEDKRSCVQCQAWKTGEKKDRXQVRQCQFKVVMVDELKENKEVIEACSFRDED
DDCTXHYTVDYPEDQTDKEXEVQVLKKKDCPPAGFLWLIPLIMFLMLLLXLLLLCCWKYC
ALQRYCPACLALLPCCGRGRMVGFKXDQYMLRQPCSPLTTCDTPLVRTGPPKSTDVVRWK
ITDNVHRSPNHPLAQVQPNPKETIQFPLSLRLNRLFTESLSHPDARDTEMLRREVDDNLN
EVYKHVPGAQKVQKTKFRLQRNAGKRKDHTIVDTVVSAPRSSYPDIVKLTEKNVQSGNFQ
DLKVVPGYYTVATDKEAAGAVEFQEGVETVDVRVPLFIKEDDDDKKKLQVEAVDVPLGIA
EIGKRFVNITIIKEHAKSIMTFLQPSYTYSRQDGVANIPISREIIEDGHTQVTYRTRDLT
AKDKKDYVTVDGELSYGPGETQQTXPVRLLELGEGDGLLKDNHVKQFVMDLSNPRQGAKL
GRYPRTTVTITDNPEPSVMMFMKSTQNFSTADPTYSIPVVRTXNQEGPATVHWKTRNAKR
FELSGPLKFAPGETEKNIVIDPRPHPGPVKPESFQLELFDPSTNGAVGERKTTMVTITDG
ALPEIAQKQQQGKDFINRTAMSPGGRLFSPTNVKAKATGPRNIRLNWDPLGSPLGYKVKY
WIYGDPETDAQVIDVKTNHAELTNLYPFCDYEMKVCGYNALGNGNYSDMVPCQTLEDVPS
EPGRLAFNVISPTVTQVSWAEPAETNGVITNYEVLYTPINDNTKPMGVAKKVKIDNPKKR
MLLIENLQSAQTYCYKVRAKNSIGWGPFREATINLASQPVRPMSIPIIPDIPIVDAEAGD
EYDGYLMYSSEVMRSPTGSKRPSVSDEDQMNGRWEQNFLFPGGNNSMSRSANMSSSSYSQ
LSPMSTLSSNHRGGAGGSMTTESSTTYHSGQGGNSLSRTQIIGGGMRTENVVMRKRSENR
GYYEYDDNIRDSIVIGDLSSGLSGYTDGKSTYGFSPTQTQYSYSMSQVLRGRTQSEDVND
ALLNLDRVLQDSRLAPGVPDTPTRLVFSALGPTALKVSWQEPHCDRDVLGYCVLYQLLNG
GDMKRIDVSSPAENSVVVQDLLPNHSYLFKVKAQSLEGWGPEREGVITIESAVNPNSPLS
PMPGSPFTLSTPSAPGPLVFTALSPEALQLSWDKPRKPNGDILGYVVTCEQLHGGGDMRS
FQVSGNSAETSLTVPDLSENMPYKFKVQARTTQGFGPEREGXITIESQDGGSTSQIGGIG
GTSQIGGIGGMSQIEGLGGMSQLGGLGGMSQIGGLGGMSQLGGLGGMSQLGGLGGMSQYS
SQSLTKRDVYQLPTEGSTHTNVTHTMINDPYFSGDGMMMTSQHTETSGMVTRHVTKEVVQ
RSMQVAGSSSVTKKVERSFYEA
NT seq
4389 nt
NT seq
+upstream
nt +downstream
nt
atgaagcagataaacaaacaactattgggggagctggagctggtcctagatctacgcata
cgggctactcctagctccctagttatccgtggtgtctgtaacgggcgtggtgtgtgtaag
tgcggtcgttgtnggtgccaggactctggcctggccatgaccnccacctgcgaggctaac
tttcaggctcagctggggatgtgtgaggacaagaggagctgtgtccagtgtcaggcctgg
aagaccggcgagaagaaggaccggnnacaagtgcgacagtgccagttcaaagtggtcatg
gtggacgagctcaaggaaaataaagaggtgattgaggcgtgtagtttccgtgacgaggat
gacgactgtacgntacactacaccgtggactaccctgaggaccagactgacaaggaanct
gaagtccaggtgctcaaaaagaaagactgtccccctgctggcttcctgtggctgatcccg
ctcatcatgttcctcatgctactgctgngtctactgctgctctgctgctggaagtactgc
gccctgcaaaggtactgtccagcatgtcttgctctactgccatgctgtggaagaggccgt
atggttggctttaagngagaccagtacatgctccgccaaccctgctcacctctgaccacc
tgcgacacgcccctagtgaggaccggcccgcccaagagcaccgacgtggttcgctggaag
atcaccgacaatgtgcaccgatcgcccaatcacccgctggcgcaggtccagccaaacccc
aaagagaccatccagttccctctgtccctgcgtctgaacaggttgttcacagaaagtctg
tctcaccccgacgccagagacacggagatgctacgcagggaggttgatgacaacctgaat
gaagtgtacaagcatgttcctggagcccagaaggttcagaagaccaaatttagattacag
agaaatgctggtaaaagaaaagaccacacaattgtagacacagtcgtgtccgctcctcgc
tccagctaccccgacatcgtcaaattgactgagaaaaacgtccagtctggaaacttccaa
gatctcaaagtggtgccgggctactacacagtggccacagacaaagaggcggctggtgcc
gtggagttccaggagggggtggagacagtagatgtgcgcgtgccgctcttcatcaaggaa
gatgacgatgataagaagaagctycaggtggaggcggtggacgttcctctgggcatcgct
gagatagggaaacgcttcgtcaacatcaccatcatcaaagaacacgccaagagtattatg
acgttcctccagccctcctacacctacagccgacaggacggagtggctaacatccccatt
agcagagagatcatagaggacggacacacacaagtcacctaccgcacccgagacctcacc
gccaaggacaagaaggactatgtgacagtggatggggaactgtcctacgggccaggggag
acccagcagactngtcctgtgcgtctattggagctgggagagggagacggtctgctgaag
gacaaccatgtcaaacaatttgtcatggacctcagtaacccaagacagggagccaagctg
ggacgctaccctagaaccactgtcaccatcactgacaacccagagcccagtgtgatgatg
tttatgaagagcacccagaacttctccaccgccgacccgacctactccatccccgtggtc
cgcacargcaaccaggaggggcctgccaccgtccactggaagacccgcaatgccaagcgc
ttcgagctgtccggtcccctcaagtttgctcccggggagactgagaagaacatcgtgatc
gacccgcgccctcaccctggaccggtcaaaccagagtccttccagctggagttgtttgac
cccagtacgaacggcgcggtcggggagaggaagacgacaatggtcacgattactgatgga
gcattaccagagattgcccagaagcagcagcagggtaaggacttcatcaaccggacagcc
atgtctcctggtggtcgtctcttctctcccaccaacgtgaaggctaaagccactggccca
cgaaacatccgtctcaactgggaccccttaggaagccccctgggctacaaggtgaagtat
tggatctatggggaccctgagactgatgcccaggtgatagatgtgaagaccaaccacgct
gagctgaccaacctgtaccccttctgcgactacgagatgaaggtgtgtggctacaacgcc
ctgggaaacggaaactacagcgacatggtgccctgtcagaccctggaggacgtccccagt
gagcccggtcgtcttgcgttcaacgtcatcagtccaactgtcactcaggtcagctgggcg
gagcctgccgagaccaacggtgtcatcaccaactacgaggtcctctacacacccatcaat
gacaacacaaagccgatgggtgtagctaagaaggtgaagatagacaaccctaagaagagg
atgttgctaattgagaacctgcagtcggcccagacctactgctataaggtccgggctaag
aacagcattggctggggtccattcagagaggcaaccatcaacctggcctcacagcccgtc
agacccatgtccatccctatcatcccagacatcccaatagtggacgcggaggcgggggat
gagtacgacggctacctgatgtacagcagtgaggtcatgaggtcgccaacaggctccaag
agacccagcgtctcagacgaagaccaaatgaacggcaggtgggaacaaaacttcctgttc
cccgggggaaataattccatgtcgcgcagtgccaatatgtcgtcttccagctacagccag
ctgtctcccatgtccaccctcagctccaaccacagaggaggggccgggggttccatgact
acggagtcctccacgacataccactctggacaaggagggaactcgctctcccgcacacag
attatcgggggcgggatgcgcacagagaatgttgtcatgaggaagcggtcagagaacaga
ggttactatgagtatgatgacaacatccgagattccatcgtcataggagacctgtccagt
ggattgtcgggatacacagacggcaaaagtacgtatggcttcagccccactcagacacag
tacagctacagtatgtctcaggtcttgcggggcaggacccagtctgaggatgtcaacgat
gcgctactgaatctggacagggtgctccaggactctcgtttggcccctggggtccctgac
acccccaccaggttggtgttctctgccctgggccccacggccctgaaggtcagctggcag
gagccccactgtgacagggatgtgctggggtactgtgtcctctaccagctactcaatgga
ggtgatatgaagcgtatagatgtgtccagcccagcagagaactctgtggtggtgcaggac
ctgctacctaaccactcctacctgttcaaggtgaaggctcagagtctggagggctgggga
ccagagagggagggagtcatcaccatagagtcagccgtcaaccccaacagcccactcagt
ccaatgccaggttctcccttcactctcagcacccccagtgctccaggccccctggtgttc
acagctctgtcccccgaggcactgcagctgagctgggacaaaccccgcaaacccaacggc
gatattctgggctacgtggtcacctgtgaacagctgcacggaggaggtgacatgcgctcc
ttccaggtgagcggtaacagcgctgagaccagtctgacggttccggacctgagtgagaac
atgccatacaagttcaaagttcaggccaggacgacccagggcttcgggcccgagagggag
ggtatratcaccatcgagtctcaggatgggggtagcacgtctcaaataggtggaatagga
ggcacgtctcaaataggtggaataggaggtatgtcccaaatagaaggcctaggaggtatg
tctcaactcggaggcctaggaggtatgtcccaaataggaggcctaggaggtatgtctcaa
ctcggaggcctaggaggtatgtctcaactcggaggcctaggtggtatgtctcagtacagc
agtcagtccttgaccaagagagatgtgtaccaacttcctacagagggcagcacacacacc
aacgtcacacacaccatgatcaacgacccctacttctcaggagacggtatgatgatgact
tcccagcacacagagaccagcggcatggtaacacgtcatgtgactaaggaggtggtccag
aggagcatgcaggtggccggctccagcagcgtcaccaagaaggtcgagaggtcgttctat
gaggcctga
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integrated database retrieval system
