Salvelinus sp. IW2-2015 (Arctic char): 111968389
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Entry
111968389 CDS
T05762
Name
(RefSeq) platelet-activating factor receptor-like
KO
K04279
platelet-activating factor receptor
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04020
Calcium signaling pathway
salp04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
111968389
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
111968389
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
salp04030
]
111968389
G protein-coupled receptors [BR:
salp04030
]
Rhodopsin family
Others
Platelet activating factor
111968389
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srx
7tm_4
Motif
Other DBs
NCBI-GeneID:
111968389
NCBI-ProteinID:
XP_023849642
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Position
LG9:29811479..29812823
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AA seq
491 aa
AA seq
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MGGDYGRTRDPSLAGVAKEYRETATTPGSXATETSRFWGGGGHKGQSAELRCEPETVWQT
MEVFNEEYQREVLVRKMLQRRCAEERVFSPLGGGHKELSVEPWREPETVGEVMELLEESE
QREMLVRCILNGTRPEERVTSRVQPGTAPLTRPPVRLSSPRELLALAEPTVESTMGMQED
LAVTRTVNLSSVVNRTFLDSDFRYTLFPVFYGVVVVLGLIANSYVLFVLQHMHDTKAMNE
IRIYXANLTCADLLFVCALPFWIGYYHHRGDWRYGDFLCRVTGVFFFFINTYCSILFLAA
ISVNRYWAITRPLYAASSDCWRRGVAITAVIWALTLSMSVPYLLETGIQVDDGNVSRCFE
GYHNKTDDEKRTVATTHLMWCFVLVFFLQGPWTLAVLEIKEGWGRMDWGQRTRQWLNDAH
QVTLMLMGLNCLLDPVVYCFATRKFRLYIKDHLKKVGRGKGCSETAITHISMVECKNVSQ
RLHSEQKQLKV
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgggaggagattatgggcggacacgagacccttccttggcaggagtcgcaaaggagtat
agggaaacagcgacgacgccgggatccrcggccacagaaacctcaagattttggggggga
ggggggcacaaggggcagtcggctgagctgaggtgtgagccagagaccgtctggcagacg
atggaggtgtttaatgaggaataccagagagaggtgttggtgaggaaaatgttgcagcgt
aggtgtgctgaagagcgtgtcttcagtccgttggggggggggcacaaggagctgtctgtc
gagccgtggagagagccagagaccgtcggggaggtgatggagctgttggaggagagtgaa
cagagagagatgttagttaggtgtattctgaacggcactcgccctgaagagcgtgtcacc
agtcgggtgcaaccggggacggctccactcacgaggcctccagtgcgcctctccagcccg
agggagttgcttgctttagcagaaccaacagtggagtcgaccatggggatgcaagaggac
ttagcagtgactaggacagtgaacctatcgtcagtcgtcaacagaaccttcctggactcg
gacttccgttacaccctcttcccagtgttttacggtgttgtggtcgtccttggtctgata
gccaacagttacgtgctgttcgtgctgcagcacatgcacgacaccaaggccatgaatgag
atccgcatctacatsgccaacctgacttgtgccgacctcctcttcgtgtgcgccctcccc
ttctggattggctactaccaccaccgcggtgactggcgctacggcgacttcctgtgccgc
gtcaccggtgtgttcttcttcttcatcaacacttactgctccatcctcttcctcgccgcc
atcagcgtcaaccgttactgggccatcacgcgcccgttgtatgccgcctcgtccgactgt
tggcgccgcggggtggccatcacggcggtcatctgggcgctcactctgtccatgtccgtg
ccgtacctcttggagacgggcatccaggtggacgacggaaacgtgtcgcgctgctttgag
ggctaccacaacaagactgacgacgagaagcggactgtggccaccacccacctcatgtgg
tgcttcgtcttggtcttcttcctccagggcccctggactctggctgtactggagatcaag
gagggctggggcagaatggactggggccagcggaccaggcagtggcttaacgatgcccac
caggtcaccttgatgctgatggggctcaactgcctcctggaccctgtagtgtactgcttc
gccaccaggaagttccgcctctacatcaaggaccatctgaaaaaggtggggagggggaaa
ggatgctcggaaacagccatcacacacatttctatggtggagtgcaagaatgtgagycag
cggctccatagcgaacagaagcagctcaaggtttaa
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