Salvelinus sp. IW2-2015 (Arctic char): 111968402
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Entry
111968402 CDS
T05762
Name
(RefSeq) LOW QUALITY PROTEIN: A disintegrin and metalloproteinase with thrombospondin motifs 9-like
KO
K08624
a disintegrin and metalloproteinase with thrombospondin motifs 9 [EC:3.4.24.-]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
salp01002
]
111968402
Peptidases and inhibitors [BR:
salp01002
]
Metallo peptidases
Family M12: astacin/adamalysin family
111968402
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP1_ADAMTS
TSP_1
ADAMTS_spacer1
Reprolysin
Pep_M12B_propep
ADAMTS_CR_2
Reprolysin_5
ADAMTS_CR_3
TSP1_spondin
Reprolysin_3
Reprolysin_2
Reprolysin_4
TSP1_CCN
Motif
Other DBs
NCBI-GeneID:
111968402
NCBI-ProteinID:
XP_023849661
LinkDB
All DBs
Position
LG1:complement(45068579..45111599)
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AA seq
1458 aa
AA seq
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MHVLFWGLGFLLFLPDVLNVVLSTEKSLLNSRKAKVSEQLGAYEIVTPARVNEAGDNFPT
SVHFKRKRRSVDDIPGNASDQWDSPTIHYKISAFGQSYHLNLTLESGFIAPLYTVTVLGA
LTDSNITDFTPEVEAEEDTEYQHCFYKGXVNAQTEHTAVISLCSGLLGTFRSPEGEFFVE
PLHSYNGEHYEEEHTKPHIVYRKKAPKKEAAREDTACDTSGQKHRHKRNRDKVRRRPMAS
SSDMLNDLESLSADPLSRSERESSRRPANESSGDSGPHRRSKRFLSYPRFVEVMVVADSK
MVEHHGSNLQHYILTLMSIVSSIYKDPSIGNLINIVIVKLVIINNELDGPTISFNAQTTL
KNFCIWQQRQNHQDENHHSHHDTAILITRQDICRARDKCDTLGLAELGTVCDPYRSCSIS
EDNGLSTAFTIAHELGHVFNMPHDDSNKCKEEGVKIQQHVMAPTLNHYTNPWMWSKCSRK
YITEFLDTGYGECLLDEPISRPYSLSQQLPGRIYNVNKQCELIFGPGTQVCPYMVQCRRL
WCTSPEGAQRGCRTQHMPWADGTECSPGKHCKHGQCITKSHDATAVQGAWGGWSPFGSCS
RTCGGGIKIADRECNQPMPKNGGKYCVGRRMKFRSCNSEPCSKQKRDFREEQCAAFDGRH
FNINGLPPNVRWVPKYSGIQMKDRCKLFCRVAGSTAYYQLRDRVIDGTPCGPDTNDICVQ
GLCRQAGCDHVLNSKARRDKCGVCGGDNSSCKTVAGTFNMVRYGYNEVVRIPSGATNIDV
RQHSYSGKPEDDNYLAVSNIRGEYLLNGEFVVSMFKREIKLGNTIIEYSGSDHIIERINC
TDRIEEEIIVQVLSVGNLYNPDVRYSYNIPIEDKPQQFIWDAYGPWQECSRPCQGERKRK
ILCSRESDRVVVSDQRCHGAARPAMVTEPCNADCEIRWHVARKSECTVPCGVGYRTLEIY
CAKLSRTDGKTQKVDERYCSSQRKPEDKESCHGDCNPAGWEYSSWSECSKSCGGGSRRRA
AVCGKSSEAESDESKCSQRDKLTTAQNCNEFLCPAWKTGDWSECPVTCGKGYKHRQTWCQ
FAEDRRDDRFCDSASKPESVQTCQQQDCASWQVGPWGQCTTSCGPGYQMRAVKCVVRSYG
SVMDDTECNAATRPTDTQDCEPAQCPVSHPVPPGTKVPSHLSHKTQWRFGSWTQCSSTCG
KGTRMRYVSCRDIQGGVAEDSACSHLVKPPASDGCIVVHCGQWKVLEWTSCSVSAGRGRP
LARWWCLKXSDQIVDVVECDPDDRPATEQECAMSQCPALRSSDSRPFPSPSGGVRNNLPT
AADGRSGGRTQAHQWRTGPWGACSSTCAGGFQRRVVVCQDENGYAANNCEDRSKPIEQRS
CESGPCPQWVYGNWGECTTPCGGGIKTRLVVCQRPNGERFNDLSCEILEKPPDREQCNTH
ACPSSPHWSTDPWSSVRS
NT seq
4377 nt
NT seq
+upstream
nt +downstream
nt
atgcatgtgctgttttggggactagggtttctgctatttctccctgacgttttgaatgta
gtgttatccacggagaaatcgctattgaattcaagaaaagctaaagtgtctgagcagctt
ggcgcatacgagattgtaactccggcgcgagtgaatgaagccggtgacaactttcccacg
agcgtgcacttcaaaaggaaacggcggagtgtggacgatatccctggcaacgcctctgat
caatgggactctccaacaatccattacaaaatatctgctttcggacagagctatcacctc
aacctgacactcgagtccggatttattgctccgctatacactgtgacagtactaggagca
cttaccgatagtaacataacggatttcacaccggaggtggaggcggaggaggatacggag
tatcagcattgcttctataaaggayatgtgaatgctcaaacggagcacaccgcagtcatc
agtctctgctctggattgcttggcactttcaggtcaccagaaggggagttttttgtggag
ccccttcacagctacaatggagaacactatgaagaagaacacaccaaacctcatattgtg
tacaggaagaaggcccccaagaaagaggcagccagggaggacactgcttgtgacacatca
ggacagaaacacagacacaagaggaacagggacaaggtgaggagacgtccgatggccagc
agtagcgacatgctgaatgacctggagagcctgtctgccgatcccctctccagatcagaa
agagagagcagcagacggccggctaatgaaagcagcggtgactcaggacctcacaggaga
tcaaagcgcttcctctcctatccccgctttgtagaagtcatggtggtggcagacagcaag
atggtggaacatcacgggagcaaccttcagcactacattctcacgttaatgtccatcgtg
tcttccatctacaaggatcccagcatcggaaatcttattaacattgtgattgtgaagtta
gtcataatcaacaatgagctggatggccctaccatttccttcaatgcacagaccacttta
aagaacttctgtatctggcaacagaggcaaaatcaccaagatgagaatcatcactcccac
cacgacacagccattctcatcaccaggcaggacatctgtcgagcgcgggacaagtgtgac
acattagggcttgcagagctgggtacagtgtgtgatccatacagaagttgcagtattagt
gaggacaatggactcagcactgcgtttactatcgcccatgaactgggccatgtattcaac
atgccccatgatgacagcaacaagtgcaaagaggagggggttaaaatacagcagcatgtg
atggcgcccacactcaaccactacactaacccctggatgtggtccaagtgtagcaggaaa
tacatcacagagttccttgacacagggtatggcgagtgcttacttgatgagcccatttct
aggccatacagtctgtcacagcagctgcctggacggatatacaatgtcaataaacaatgt
gaattgatatttgggccggggacacaggtgtgcccatatatggtccagtgccgcaggctg
tggtgcaccagcccagagggggcccagaggggctgcaggacccaacacatgccctgggcc
gacggaacagagtgctctccaggaaagcactgtaaacatggccagtgcattaccaagagc
cacgatgccacagcagtgcagggggcgtggggaggctggtctccgtttggctcctgctcg
cggacgtgtggcgggggcatcaaaatcgccgaccgcgagtgcaaccaacccatgcccaag
aacggggggaagtactgtgtggggcgcaggatgaagttccgctcatgtaactcagagccc
tgctccaagcagaagagggacttcagagaggagcagtgtgcagccttcgacggccggcac
ttcaacatcaacggtctacctcctaatgtgcgctgggtacccaagtacagcggaattcag
atgaaggatcgctgtaagctgttttgcagggtggctggcagcaccgcctactatcagctc
agggatcgggtcatcgacggcacgccatgtggccccgacaccaacgacatctgtgtgcag
ggcctgtgcaggcaagcgggatgtgaccatgtcttgaattccaaggcgaggagagataag
tgtggtgtgtgtggcggtgacaactcctcgtgcaagaccgtggcaggcaccttcaacatg
gtgcgctacggatacaacgaagtggtgagaatacccagtggtgctacaaatattgatgtt
cgtcaacacagctactcagggaaaccagaagacgataactacctcgctgtttcaaacatc
agaggggagtatctgctcaatggagagtttgtggttagcatgtttaaaagggaaatcaaa
ctgggcaacaccatcatcgagtacagcggatctgaccacatcattgagagaatcaattgc
actgaccgcatcgaagaagagatcattgtccaggtgctttctgtaggtaacttgtacaac
ccagacgtcaggtactcctataacatccctatcgaggataaaccccagcagttcatctgg
gacgcctacgggccctggcaggagtgcagcaggccctgccaaggagagcgtaagaggaag
atcctgtgtagtagagagtcggaccgtgtggtggtctcagaccagaggtgccatggggct
gccagaccagccatggtcacagaaccctgcaacgcagactgtgaaatcaggtggcatgta
gcgcggaagagtgagtgtacagtcccatgtggagtgggatatcgtacactggagatctac
tgcgccaaactcagccgtaccgatggaaagacccagaaggtggacgagcgttattgcagc
agtcaacgtaaacctgaggacaaggagagttgccatggtgactgtaacccggccggttgg
gagtactcctcttggtcagagtgctccaaaagctgtggcggagggtcccggcgtcgtgca
gccgtgtgtgggaagtcctctgaggcagaaagtgatgagagtaagtgcagccagagagac
aagctgaccaccgcccagaactgcaatgagttcctgtgtcccgcgtggaagaccggagac
tggtctgagtgcccagtgacgtgtgggaaagggtacaagcaccggcagacatggtgccag
tttgcggaggaccgacgggacgaccgcttctgtgactctgcgtccaagcctgagtcggtc
cagacgtgtcagcagcaggactgtgcctcgtggcaggtcggaccttggggccagtgcact
acctcgtgtggaccaggctaccagatgcgagcggtgaagtgcgttgtgaggtcatatggg
tctgtcatggacgacactgaatgtaacgcggccacacggcccactgacactcaggactgt
gaaccggcccagtgtcctgtcagccacccagttccccctgggaccaaagtcccctcacac
ctttcacacaaaacccagtggaggttcggctcttggacacagtgtagctccacctgcggc
aaagggacccggatgcgctatgttagttgccgtgacatccagggtggggttgcagaggat
tctgcctgctcccacctggtcaagcccccagccagcgacgggtgcattgtagtgcactgc
ggacagtggaaggtcctagaatggacttcatgctctgtatctgcgggcaggggaagacca
ctcgccaggtggtggtgtttgaaanntagtgaccagatagtggatgtggtggagtgtgac
cctgacgaccgtccagccacagagcaggagtgtgccatgtcccagtgccctgctctccgc
tccagtgattctcgacccttcccctcgcccagcgggggcgtccgcaacaacctgcccacg
gctgccgatgggcgcagcggaggacgaacccaggcccaccaatggaggacaggaccctgg
ggagcgtgctcgagcacatgtgcgggtggcttccagaggcgtgtggtggtgtgccaagat
gagaatggttatgctgccaacaactgtgaagatcgctccaaacccatcgagcagcgctcc
tgtgagtccggaccctgtccacagtgggtctacgggaactggggagagtgtaccacgccg
tgtggtggaggaataaagacacggctggtggtgtgtcaaaggcccaacggagaacgcttt
aacgatctgagctgtgagattctagaaaaaccgcccgaccgtgagcagtgcaatactcat
gcgtgcccgtctagcccccattggagcacagacccatggagctcggtgcgctcgtaa
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