Salvelinus sp. IW2-2015 (Arctic char): 111968415
Help
Entry
111968415 CDS
T05762
Name
(RefSeq) membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1 isoform X1
KO
K05631
atrophin-1 interacting protein 3 (BAI1-associated protein 1)
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
111968415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
MAGI_u5
PDZ_2
MAGI_u1
WW
Guanylate_kin
DUF6288
PDZ_Tricorn
Serglycin
Motif
Other DBs
NCBI-GeneID:
111968415
NCBI-ProteinID:
XP_023849686
LinkDB
All DBs
Position
LG1:complement(45202697..45391787)
Genome browser
AA seq
1662 aa
AA seq
DB search
MAKVIQKKNHWTTKVNECAVLKDAPGDLNVPLLGGAENGEFAYIGQVNEDIVIYKNGKLT
EGELILEVENLSISGLPLYDVQTVINNCKGPIRLKTVRQGTKLNKDLKHYLSQRFQKSSQ
DHELQQTIRDNLYRHAVPCTTRPPRDGEVPGIDYNFLPVEDFLALEQSGTLLEIGAYEGN
YYGTPKPPRQPPSGKVITSDALKDSLPGSQHSTPRRTKSYNEMQNAGIVPVDLEEDEELP
EMNSSLTDNTYCSRNTRLVNTGDSSEPDEHPYTPRENAPSYGVNNTLSSTTEDSQQTHTH
LSHPPTEEDPLGPLTDNWEMAYTENGELYFIDHNTKTTSWIDPRCLDKPPKPLEECEDDE
GVHTEELDSELELPTGWEKIDDPVYGVYYVDHINRKTQYENPIVEAKRRKQLEQQQPPEG
ERYIREWIEDATLAGAPLASYTANHQETYRDPQAGPPLPPLIGPKRGKPFFTRNPAELKG
TFINTKLRKSHRGFGFTVVGGDEPDEFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVL
GYTHAQVVKVFQSIHIGSMVNLELCRGYPLPFDPDDPNTSMVTSVAIVDKEPIIVNGQDS
YDSPSSHGSHSGGPVNGMRESRPHSPSSGEVASNSSHGYLSDSVTLASSIATQPELITVH
MEKGDKGFGFTIADSPAGGGQRVKQIVDYPRCRGLKEGDIIVEVNKRNVQSMSHNQVVDL
LSKCPKGSEVSMLVQRGGGVVPAKKSPRLQLARKDSQNSSVSSHRSTHTNSPVHTSLAPP
LSKSTAPPPPSQPLPGLPPQDPQADGTIQRKPDPFKIWAQSRSMYESRLPDFQEQDIFLW
RKDTGYGFRILGGNEPGEPIYIGHIVKYGAADEDGRLRSGDELICVDGTAVMGKSHQLVV
QLMQQAAKQGHVNLTVRRKTGYGVSKGEGEVPPSPASSLHSSTQAPSLTEGKRTPQGSQN
SLNTVSSGSGSGSGSTSGIGSGGGGGSGSAVVNTTLQPYDVEIHRGENEGFGFVIVSSVS
RPESGTTFGRIIEGSPADRCGKLKVGDRILAVNGCSITNKSHSDIVNLIKEAGNTVTLRI
IPGDDSSNASLLTNAEKIATITTTHTPQQQAAPEPRNNTKPKQESSFEFKSPQAPPPPAP
TTQPPAQDAAFYSVDLERENKGFGFSLRGGHEYNMDLYVLRLAEDGAAVRNGNMNVGDEI
LEINGESTKGMKHARAIELIKDGGRHAHLVLKRGDGSVPEYDPSIDGAGPAAGVQNASEM
STLPHNNAPSDTNTPDPHKPSRSKDKKGHHHSKHRHRSPDKRSKSKGGASGETGASSNQS
KRKGDKSKRSGGDNHGTHQHHNNSSGHRHRRHRSPDKGRSRARSAEKTLDSRQSQGHRER
EGRSPDRHHTHRQRSPYRSPRRNRSPYGHRSPYGHRSPYRSRHHSPTRYHRTQSSDPYRQ
PSPYRRRGREPERPNGGVAPVLRKPPGPVPSPYREESVLREPPALDRLNREATLSREPPA
LDRLNREATLLRESREQRLFEEDSLLLRASTLERDYRGDGLLSAAARGQRGETMPRVRTP
ESDSAYKRYSSLLRGRSPERVEREARYAPREESPDPRYRVQSLGRDISPVRSFIELEEEE
GATAPRLKESYSTLKSDISRASKAPPEPKRKAYKDSPKDLSI
NT seq
4989 nt
NT seq
+upstream
nt +downstream
nt
atggccaaagtgatccaaaagaagaatcactggaccaccaaagttaacgagtgcgcggtt
ctcaaagacgctccgggtgacttgaatgtgccattgctgggcggtgcagagaacggagag
ttcgcctacatcggacaagttaacgaggatatcgttatttacaaaaatggaaaattaaca
gagggggagttgatattggaagtagagaacctatcgatctctggattgcctctgtacgat
gtacagacagtgataaataactgcaagggtcccatcagattgaaaacagtcagacaagga
accaagctaaataaggacctgaagcactatctgagccagcgcttccagaagtcctcccag
gaccacgaactgcagcagaccattcgagacaacctctaccgccatgcagtgccttgtaca
acccgccccccacgtgacggagaggtccctggaatagattacaacttcctgcctgtggag
gactttctggctttggagcagagcgggacccttctggaaataggagcatatgaaggtaac
tattatggaacacccaagccgccaaggcagccccctagtgggaaagtgattaccagtgat
gctttgaaagacagcctcccgggctcccagcactccactccccgacgcaccaagtcctac
aatgagatgcaaaatgctggaatagtgcctgtagacctggaggaggacgaggaactcccg
gagatgaacagtagcttaacagataatacatattgttctagaaatactaggctcgtgaac
acaggagactcgagtgaacctgacgagcatccctacaccccgcgtgagaacgccccgtcc
tacggtgtgaacaacacattgtcatccaccacggaggactctcagcagacacacacacac
ctcagccatcctcccacagaagaggaccccctgggacctctaactgataactgggagatg
gcctacaccgagaacggagagctctactttatagaccacaacacaaaaaccacttcctgg
atcgacccacgctgcctggacaagcctcccaaacccctggaagaatgtgaagatgatgaa
ggggtacacacagaagagctggacagtgagctagagctgccaacaggctgggagaaaata
gatgacccagtctatggtgtttactatgtggatcacattaacaggaagacccagtatgag
aaccctatagtagaggctaagcggcggaagcagctcgagcaacagcagccaccagaaggt
gagcgctacatccgagaatggatagaggacgccaccctggctggtgccccgctggccagc
tataccgccaaccaccaggagacctacagggatccccaggctggacccccactgccgccc
ctcatcgggcccaaacgagggaagcccttcttcacacggaacccagcagagctaaaggga
accttcatcaacaccaaactgaggaagagccaccgggggttcggcttcaccgttgtcggg
ggcgacgagcctgatgagttccttcagatcaagagtctggttctggacgggcctgctgcc
ctcgacggcaagatggagacaggtgacgtgatcgtgagtgtcaatgacacatgcgtgcta
ggctacacccatgcccaggtggtgaaggtcttccagtccatccatattggctccatggtc
aacctggagctgtgccgcggctacccccttccttttgaccccgacgaccccaacaccagc
atggtgacctccgtggccatcgtggacaaggagcccatcatcgtcaatggccaggatagc
tacgactccccgtccagccacggcagccatagtgggggccccgttaatggcatgagggag
tcgagaccacacagtccctcctccggcgaggtggcgtccaacagctcgcacggttacctc
agcgactctgtgacgctggcgtcatccatagcgacgcagccggagctgatcacagtgcac
atggagaagggagacaaaggctttgggttcactatcgcagacagccctgcagggggagga
cagagggtcaaacagatagtggactacccccgctgcaggggcctgaaggagggggacatt
atcgtggaggtgaacaagaggaacgtccagagcatgagccacaaccaagtggtggacctg
ctcagcaagtgccccaaaggaagtgaggtcagcatgctggtgcagagaggcggaggggtg
gtacctgcaaagaagagtccaaggctgcagttagcgaggaaggacagtcagaacagttct
gtatccagccaccggagtacccacactaactcccctgtgcacacgtccctggccccccct
ctcagcaagagtaccgcccccccacccccctcccagcccctgcccggcctgcctccccag
gacccgcaggcagacgggaccatccagaggaaaccggaccccttcaagatctgggcccag
tccaggagcatgtatgaaagtaggctgcctgacttccaggagcaggacatcttcctgtgg
agaaaggacacgggctacgggttcaggatcctgggagggaacgagccaggagaaccgatc
tacatagggcacatagtgaagtatggggcggcggatgaggatggacgcctgcgttcaggg
gatgagctcatctgtgtggacggtacggcagtgatgggcaagtctcaccagctggtggta
cagctgatgcagcaggccgccaagcagggtcacgtcaacctcaccgtgcgacgcaagacc
ggttacggagtgtctaaaggggagggcgaggtgcccccgtccccagcctcgtcactccac
agcagcacccaggccccctccttgactgaggggaagcggaccccccagggcagtcagaac
tccctcaacacggtcagctctggcagcggctccggcagcggctccaccagcggcatcggc
agcgggggcggcggaggctcaggcagtgctgtggtcaacaccaccctgcagccctacgac
gtggagatccaccgcggggagaacgagggctttggattcgtcatcgtctcctccgtgtcc
cgacccgagtctggcaccacctttgggcgtattatcgaggggagccctgcagaccgctgt
gggaagctgaaggtgggagaccgtatcctggctgtcaatggctgctctatcaccaacaag
tcccactcggacatcgtcaacctgatcaaggaggccgggaacactgtcacgctaaggatc
attcccggagacgactcctctaatgcatcactactgaccaatgctgagaagatcgccact
ataacaaccactcacacgccccagcaacaggctgcacctgaacccagaaacaacaccaaa
ccaaaacaggagtcctcttttgagttcaaatccccccaggcccctcctccccccgcccca
acaacacaacctccagcccaggatgctgcgttctactcagtggacttggagagggagaac
aaaggttttgggttcagcctgcgaggaggtcacgagtacaacatggacctgtacgtgctg
aggctagccgaggacggagcggccgtacgcaacggcaacatgaacgtgggagatgagatc
ctggagatcaacggtgagagcaccaagggcatgaagcacgcccgcgccattgaactgata
aaagatggtggccgccacgcccacctggtcctcaagaggggtgacggctcggtgcctgaa
tatgaccccagcatcgacggtgccggcccagccgcaggggtacaaaacgcttcggaaatg
agcaccctgccccacaacaacgcaccatcggacaccaacacaccagaccctcacaaacca
tcacggagcaaggacaagaagggccaccaccattcaaaacacagacaccggtccccggac
aagaggagcaagagcaaggggggggcgtctggggagacaggggcctcctccaatcagtcc
aagagaaagggcgacaagagcaagaggtctggtggggacaaccacggcactcaccaacac
cacaacaacagtagcggccaccgccaccggagacaccgctcccctgataagggtcgtagc
cgggcccgcagcgcagagaaaaccctggacagtagacaaagccaagggcacagagagagg
gaaggccgctcccctgaccggcaccacacccaccgccagcgctctccctacaggtcccct
cggcgcaatcggtcaccctatggccaccgctccccctatggtcaccggtcaccctaccgc
tcacgccaccactcccccacccgctaccaccgcacccagtcatcagacccctaccggcag
ccctccccatacagacggaggggccgggagccagagaggcccaacgggggggtggcacca
gtgctgaggaagcctccaggccctgtgcccagcccctatcgtgaggagagtgtgctgcgg
gagcctccagccctggaccggctcaacagggaggccacgctgtcgagggagcctccagcc
ctggaccggctcaacagggaggccacgctgctgagggagtccagggagcagcgcctgttt
gaggaggatagccttctgctgagggcatccaccctggagcgtgactacagaggagatggc
ctgttatctgctgctgcccgtggccagagaggagagaccatgcccagggtccgtaccccc
gagtccgacagcgcctacaagaggtacagctcactgctgaggggccgctcgcctgagagg
gtggagagagaggcacgctacgcccccagagaggagtccccagacccccgctacagagtc
cagagtctgggcagagacatctcacctgtcaggagcttcatagagctggaggaggaagag
ggagcaacagcacccaggctgaaggagtcttacagcacactcaagtctgacatcagccgt
gcttccaaagcacccccggagcccaagcggaaggcttacaaagacagccccaaagatctg
agcatctga
DBGET
integrated database retrieval system
