Salvelinus sp. IW2-2015 (Arctic char): 111968512
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Entry
111968512 CDS
T05762
Name
(RefSeq) neuronal PAS domain-containing protein 3-like
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
salp03000
]
111968512
Transcription factors [BR:
salp03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
111968512
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_3
PAS_11
PAS_9
Motif
Other DBs
NCBI-GeneID:
111968512
NCBI-ProteinID:
XP_023849908
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All DBs
Position
LG9:complement(7818265..7865418)
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AA seq
666 aa
AA seq
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MALTHSRSVPIQIMGMVVVAHALPPPTINEVRIDCQMFVTRVNMDLNIVYCENRISDYMD
LTPLDIVGKRCYQFIHAEDVEGIRHSHLDLINKGQCVTKYYRWIQKNGGYIWIQSSATIA
INAKNANEKNIIWVNYVLSNPEYKDTPMDIAQLPNLPEKASESSETSDSESESKENSEDN
ENSKSDGKGNQTENSEDPETDSKKQQQGQSSSEQEMRRQEEGDSSSNPESQESEDDLEPS
DCELETKESRLGRLGGLHIKVEHYGDRDGRVELHNSPSSSEEEEDDDEDDDDDDDDSIKD
CDRATEMLAAPAASKQQKRKKRRKKQKWDGSRSRRLRLSSATTSPGIMNHPTLGGDAALL
LPPSPASASVLKIKTEMSEPINFDNDSSIWNYPPNREISRNESPYSMTKHVPTHDTFPSP
QPGSLQVSIPDSVLTPPGTEGGGGGGGTRKGVPPSFNGNSSAPSSASSVASLAPPSSSGS
SSDPLSPPLSASPRDKQQGQGTPTASNSSSSLLYTSDLEALQRLQAGNVVLPLVHRVTGT
LATTSTAASRVYTTGTIRYAPADVTLAMQAGANLLPNNVAHAMNFVDVNGSPGFGIDPKT
PMEMLYHHVHRLNMAGPFGGAVSGASLTQMPATNVFTTAEGLFSTLPFPVYSNGIHNTQT
LERKED
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atggcattgacccacagtcggtcggtacccattcagatcatgggcatggtggtggtagcc
cacgccctcccccctcccaccatcaacgaggtgcgcatagactgccaaatgtttgtcacc
cgggtcaacatggacctcaacattgtctactgcgagaatagaattagcgactacatggac
ctgacgccattggacatcgtagggaagaggtgttaccagttcattcatgcggaggacgtg
gagggcatccgacacagccatttagacttgataaacaagggacagtgtgtgaccaagtac
taccgctggatccagaagaacggtgggtacatctggatccagtccagtgccaccatcgcc
atcaatgccaagaacgccaatgaaaagaacataatctgggtcaactacgtactcagtaat
ccagagtacaaggacacgcccatggacatcgcccagctgcccaaccttccagagaaagcc
tctgagtcttcagagacttccgactccgagtccgagtccaaagagaactctgaagacaac
gagaactcaaagtcggacggaaaggggaaccagactgagaacagcgaggacccggagaca
gacagtaaaaagcagcagcagggccagtcgtcctcagagcaggagatgaggcgtcaggag
gagggagacagctcctccaacccagagagccaggagagcgaggatgacctggagcccagc
gactgcgagctggagaccaaggagagcagactaggccgactggggggcctgcacatcaag
gtggagcactacggagatagagatggaagagtagagctgcacaactcgccgtcctcctct
gaagaagaggaagatgatgatgaggacgatgatgatgatgatgacgacagcattaaagac
tgtgacagggccactgagatgctcgccgcccccgccgccagcaagcagcagaagcgtaag
aagaggaggaaaaagcagaagtgggacggtagtcgttctagacgcctgcgcctctcctct
gccaccaccagccctggcatcatgaaccaccccaccctggggggggacgccgccctcctg
ctgcccccctcccctgccagtgcatccgtgctcaagatcaaaacagaaatgtccgagccc
atcaacttcgacaacgacagcagcatctggaactaccctcccaacagggagatctccagg
aatgagtccccctacagcatgacgaagcacgtcccaacccacgacacctttccctcccca
cagcctggcagtctgcaggtctccatcccagactcagtgctcactcccccaggaacagag
ggaggcggcgggggtggaggaaccaggaagggcgttcctccctccttcaacggtaacagc
agcgccccctcctcggcctccagcgtggccagcctggcccctccctccagctctggctcc
tcctccgaccccctgtccccacccctctcagcctcgccgcgcgacaagcagcagggtcag
ggcacccccaccgcctccaactcctcctcctccctgctgtacaccagcgacctggaggcc
ctgcagaggttgcaggctgggaacgtggtgcttcctctggtccaccgggtcaccggcacc
ctcgccacgaccagcactgccgcctcccgggtgtacaccactggcaccatccgctatgcc
cccgccgacgtcaccttggccatgcaggcaggcgccaacctgttgcccaacaacgttgcc
cacgctatgaactttgtggatgtcaacggtagccccggcttcggcatcgaccccaagacg
cccatggagatgctgtatcatcacgtccaccggctcaacatggctggcccctttggcggt
gccgtgtccggcgccagcctcacccagatgccagcaaccaatgtattcaccacggcagag
ggactattctctactcttccattccctgtctacagtaacgggatacacaacacacaaact
ctggagcgcaaagaagattaa
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