Salvelinus sp. IW2-2015 (Arctic char): 111968526
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Entry
111968526 CDS
T05762
Symbol
scfd1
Name
(RefSeq) sec1 family domain-containing protein 1
KO
K19998
sec1 family domain-containing protein 1
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
salp04131
]
111968526 (scfd1)
Membrane trafficking [BR:
salp04131
]
SNARE
SNARE associated proteins
Syntaxin-binding proteins
111968526 (scfd1)
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
111968526 (scfd1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec1
Motif
Other DBs
NCBI-GeneID:
111968526
NCBI-ProteinID:
XP_023849934
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Position
LG9:complement(8547488..8568632)
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AA seq
634 aa
AA seq
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MAASVREKQAAALKRMLNFNTSPLKNTAAEPVWKVLIYDRFGQDIISPLLAVKELRDMGI
TLHLLLHSDRDPIPDVPAIYFVMPTEENIDRICQDLRNQLYESYYLNFISAISRSKLEDI
ASAALSANAVTQVTKVFDQYLNFITLEDDMFILCNQNKELISYHAINKPDIMDTEMEAIM
DTIVDSLFCFFVTLGAVPIIRCPRGNAAEMVAVKLDKKLRENLRDARNSLFTGDNMGAGQ
FSFQRPLFVLTDRNLDLATPLHHTWTYQALIHDVLDFHLNRVSMDESVGSEASPSGARPK
KKNKKSYDLTAADKFWQKHKGSPFPEVAESVQEELDTYRAQEDEVKRLKSIMGLEGEDEG
AISSISMSDNTAKLTSAVSSLPELLEKKRLIDLHTNVATAVLDHIKSRKLDVYFEYEEKL
MSKSTLEKSLLDIISDPDAGTPEDKMRLFLIFYITALQPPSESDLDQYKKALLETGCDLS
SLNYIKQWKAFTKIAATPSNYGNSGVKPMGLFSRVMNSGSQFVMEGVKHLVLKQHNLPVT
RILDNLMEMKSNPETDDYRYFDPKMLRGSESSTPRNKNPFQEAIVFVVGGGNYIEYQNLV
DYTKAKPGKRVLYGCSELFNAGQFIKQLSSLGQK
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atggccgcctccgtccgggaaaagcaggcagctgcattgaagcgcatgttgaatttcaac
acttctccgttgaaaaacactgctgccgagccggtatggaaggtgctgatctatgacagg
tttggccaggacataatctcccctctactggcggtcaaagaactacgggacatgggaatc
actttgcacttgttgcttcattcagacagagatcccatcccggatgtgccagccatctat
tttgttatgccgacagaggagaacattgaccggatatgccaagaccttcgtaaccagcta
tatgagtcatactatttgaacttcatctcagccatatccagaagtaaactagaggatatt
gctagtgcagctctctcagccaacgccgtcacccaggttaccaaggtgtttgatcagtat
ttgaatttcatcacactcgaagatgatatgtttatcctctgtaatcaaaataaagagctc
atctcctaccatgcgattaacaaaccggacatcatggacacagagatggaggccatcatg
gatacgattgtagacagccttttctgcttctttgtcactctgggtgctgtccccataatc
cgctgtccaagagggaatgctgcggagatggtcgcggtgaaacttgacaagaaactgagg
gagaacctgcgagacgccagaaacagcctgttcactggagacaatatgggggccggccag
ttcagcttccagagacccctatttgttctcactgaccgcaacctggatcttgccacccct
ctccaccacacatggacctaccaggccctcatccacgatgtgctggacttccacctgaac
agggtcagtatggacgagtctgtggggtcagaagcttccccttccggagccagacccaag
aagaaaaataagaagagttatgacctcacagccgcagacaaattctggcagaaacacaag
ggcagcccgttcccggaggtggctgagtctgtacaggaggagttagacacgtaccgagcc
caggaggacgaggtcaaacgcctcaagagcatcatggggttggagggtgaggatgaggga
gccattagtagtattagtatgtcagacaacaccgcaaagcttacctcagctgtcagctcc
ctaccagagcttctggagaagaagaggctgattgacctccacactaacgtagccaccgcc
gttctggatcacattaagagccgtaaactggacgtgtactttgagtacgaggagaagctg
atgagcaaatccaccctggaaaagtctttactggacatcatcagtgaccctgacgcggga
acaccagaggacaagatgagactgtttctgattttctacatcacagccctgcaaccccct
tcagagagtgatctggaccaatacaagaaggctcttctagaaactggctgcgacctgtcc
tctctcaactacatcaagcagtggaaggctttcacaaagattgctgccacaccatctaac
tatgggaacagcggtgtgaaacctatgggcctcttctctagagtgatgaactctggctcc
cagtttgtcatggagggggtgaaacacctggtgcttaaacagcataacctgccagtcacg
cgtatcctggacaacctgatggagatgaagtccaatccggagacggatgactacagatac
tttgatcccaagatgctgcgcggcagtgagagctcaaccccaaggaacaagaacccgttt
caagaggctatcgtctttgtggtcggaggaggaaactacatagaatatcaaaacctggtg
gactacacaaaggcaaagccagggaagagggtgctgtacggatgcagtgagctcttcaat
gcagggcagttcatcaaacagctatcctcactcggccaaaagtaa
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