Salvelinus sp. IW2-2015 (Arctic char): 111968589
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Entry
111968589 CDS
T05762
Name
(RefSeq) 26S proteasome regulatory subunit 10B
KO
K03064
26S proteasome regulatory subunit T4
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
111968589
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
salp03051
]
111968589
Proteasome [BR:
salp03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
111968589
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Prot_ATP_ID_OB_C
AAA_22
AAA_16
AAA_2
AAA_5
RuvB_N
PRS7_OB
nSTAND3
DUF815
AAA_14
AAA_7
Prot_ATP_ID_OB_N
AAA_33
TIP49
AAA_11
RNA_helicase
Csa3_N
bpMoxR
AAA_3
AAA_18
Mg_chelatase
NPHP3_N
AAA_lid_PRS2_C
AAA_24
AAA_28
DUF5906
TsaE
AAA_25
NACHT
ATPase
GAS
DUF3829_2nd
AAA_17
Parvo_NS1
IstB_IS21
COG4_N
Motif
Other DBs
NCBI-GeneID:
111968589
NCBI-ProteinID:
XP_023850042
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All DBs
Position
LG9:13219872..13232898
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AA seq
389 aa
AA seq
DB search
MADPRDKGLQDYRKKLLEHKEIDGRLKELREQLREQTKQYEKSENDLKALQSVGQIVGEV
LKQLTEEKFIVKATNGPRYVVGCRRQLDKAMLKPGTRVALDMTTLTIMRYLPREVDPLVY
NMSHEDPGSVSYSEIGGLAEQIRELREVIELPLTNPELFLRVGIIPPKGCLLYGPPGTGK
TLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGG
RRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIH
IELPNEQARMDILKIHSGPITKHGEMDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHE
YVTQEDFMKAVRKVADSKKLESKLDYKPL
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atggcggatcccagagacaagggacttcaagattacagaaagaaattgcttgagcacaaa
gaaattgatggacgcttgaaagaattgcgtgaacaactgagagaacagacaaaacagtat
gaaaaatcagaaaatgatctgaaagctctacaaagtgttggacagattgttggtgaggtc
ctgaagcagctaacagaggaaaaattcattgtcaaagcaaccaatggcccacgatatgtg
gttggatgcagacggcagctggataaggctatgctcaaacctggtactagagttgcattg
gatatgaccactctgaccatcatgaggtaccttcccagagaggtggacccccttgtgtac
aacatgtctcatgaagaccctggcagcgtctcctactctgagatcggaggcttggctgag
cagatcagagagctcagagaggtgattgagctgcctctgaccaaccctgagctcttcctg
agggtgggcattatcccccctaaaggctgcctgctctacggacccccaggaactggaaag
acacttttggccagagcagttgctagccagcttgactgcaattttctaaaggtggtgtcc
agctccatagtggacaagtacattggtgagagcgctaggctgatccgagagatgttcaac
tatgccagggaccaccagccctgcatcatcttcatggatgagatcgatgccataggtggt
cgtcgtttctctgaggggacgtctgcagacagagaaatccagaggacactgatggagctg
ctgaaccaaatggatggctttgacaccctgcacagagtgaagatgatcatggccaccaac
cgtccggacacgctggaccctgcccttctaaggccagggagactggaccgcaagatccac
atcgaactgcccaatgagcaggctcggatggacattctgaagatacactctggaccaatc
actaagcatggagagatggattacgaggccattgtgaagttgtctgatggatttaatgga
gctgatttaaggaacgtgtgcactgaagcaggtatgtttgcaatccgtgctgaccatgag
tatgtgacccaggaagatttcatgaaagctgttcgcaaggttgcagattctaagaaactg
gaatccaagctggactacaagcctttatga
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