Salvelinus sp. IW2-2015 (Arctic char): 111968610
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Entry
111968610 CDS
T05762
Name
(RefSeq) gamma-aminobutyric acid receptor subunit gamma-1
KO
K05186
gamma-aminobutyric acid receptor subunit gamma
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04080
Neuroactive ligand-receptor interaction
salp04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
111968610
04082 Neuroactive ligand signaling
111968610
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
salp04040
]
111968610
Ion channels [BR:
salp04040
]
Ligand-gated channels
GABA-A
111968610
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
111968610
NCBI-ProteinID:
XP_023850075
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Position
LG9:13939339..13952823
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AA seq
468 aa
AA seq
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MNCGISAICAKLLLQHVKGKAMNAWLLLALLGVCVASFGPSTKEDEDYEDVPINKTWVLS
PKVYESDVTLILNRLLQGYDNKLRPDIGVRPTVIETAVYVNSIGPVDPINMEYTIDIFFA
QTWYDSRLKFNSSMKVLMLNSNMVGKIWIPDTFFRNSRKSDAHWITTPNRLLRLWNNGRV
MYTLRLTINAECYLKLHNFPMDEHSCPLEFSSYGYPKNEILYRWQKRSVEVADQRYWRLY
QFAFVGLRNTSDVAHTQSGEYVILTIFFDLSRRMGYFTIQTYIPCSMIVVLSWVSFWINK
DAVPARTSLGITTVLTMTTLSTISRKSLPKVSYVTAMDLFVSVCFIFTFAALMEYGTLHY
FTSNRQSKKDTDKKPQKSSSLVNIRPGTSLLQMNNIAPYQDEDDYAYECLDGKDCTSFFC
CFDDCRSGAWRENRMHVRVSKIDSYSRIFFPTAFGLFNLVYWIGYLYL
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgaactgtgggatttccgcaatatgtgccaagcttctgctgcaacatgtcaaaggcaaa
gcgatgaatgcgtggctgttgctagctcttctcggagtctgtgtggcgtcatttgggccc
agtacaaaggaggatgaggactatgaagacgtccccataaataagacctgggttttatcg
cctaaggtctatgagagcgatgtcaccttgatcttaaatagattgctgcagggctatgac
aacaaactccgacctgacattggagtaaggcccacagtgattgagacagcggtgtatgtc
aacagcatcggaccagtcgatcctattaacatggagtacaccatagacatcttctttgcc
cagacgtggtatgacagtcgccttaagttcaacagctccatgaaagtcctgatgctcaac
agtaacatggtgggaaagatctggattcctgacaccttcttccggaattctagaaagtct
gacgcccactggatcaccactccgaaccgtctgctgcgactgtggaacaatgggagagtg
atgtacacgctgaggttgactattaatgcggaatgctaccttaagctgcataactttcct
atggacgagcactcgtgtccgctggagttttcgagctatggctatcctaaaaatgagatt
ctgtaccgttggcaaaagcgttctgtggaagtggccgaccaaaggtactggagactctac
cagtttgcgttcgtcggtttacgaaacacatcagatgtggcgcatacacagtcaggtgaa
tatgtcatcttgacaatcttttttgacctgagtcggcgaatgggctacttcactattcag
acgtacatcccctgcagcatgattgtggtgctgtcatgggtctctttctggatcaataaa
gatgctgtccctgccagaacctctttaggaatcaccacggtgcttaccatgacaacgctg
agcaccatctccaggaagtcgcttcccaaggtatcctatgtgacagctatggacctgttt
gtgtctgtctgcttcatcttcacgtttgctgctctgatggaatatgggactctacactac
ttcaccagcaacaggcagagcaagaaggatacggacaaaaaaccacagaaatccagcagc
ttggtgaacattaggccagggacgtcactgctccagatgaataacatcgccccctaccaa
gacgaggacgattacgcctacgagtgtctggatgggaaggactgcaccagcttcttctgc
tgcttcgacgactgtcgctccggagcatggcgcgaaaaccggatgcatgtccgagtttca
aagatcgattcctactcacgaatattcttccccaccgccttcggccttttcaacctggtc
tactggattgggtatctgtacttataa
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