KEGG   Salvelinus sp. IW2-2015 (Arctic char): 111968625
Entry
111968625         CDS       T05762                                 
Symbol
cdc5l
Name
(RefSeq) cell division cycle 5-like protein
  KO
K12860  pre-mRNA-splicing factor CDC5/CEF1
Organism
salp  Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:salp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    111968625 (cdc5l)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:salp03041]
    111968625 (cdc5l)
   03400 DNA repair and recombination proteins [BR:salp03400]
    111968625 (cdc5l)
Spliceosome [BR:salp03041]
 Complex B
  Other components
   Prp19 complex
    111968625 (cdc5l)
 Complex C
   Prp19-CDC5 complex
    111968625 (cdc5l)
DNA repair and recombination proteins [BR:salp03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    111968625 (cdc5l)
SSDB
Motif
Pfam: Myb_Cef Myb_DNA-binding Myb_DNA-bind_6 TPR_HPS5_insect DUF4072 Rap1_C
Other DBs
NCBI-GeneID: 111968625
NCBI-ProteinID: XP_023850109
LinkDB
Position
LG9:complement(14362545..14379981)
AA seq 806 aa
MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKK
TEWSREEEEKLLHLAKLMPTQWRTIAPIIGRTAAQCLEHYEFLLDKAAQRDNEEDTADDP
RKLKPGEIDPNPETKPARPDPVDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEAR
RLAALQKRRELRAAGINAQKKRKKKRGVDYNAEIPFEKKPSQGFYDTSMELYEGLEPNFK
RLRQQHLDGELRNEKEEKERKRDRQKIKKKKESDLPSAILQTSGVAEFTKKRSKLVLPAP
QISDAELEEVVKLGQASEVARQTAEESGITNSASSALLSEYSLTNSAMATGLRTPKTPAA
QDKILQEAQNLMALTNVDTPLKGGLNTPLHQSDFSGVTPQRQAVQTPNTVLTTPFRTPGP
GSEGSMTPQGGLTPKGPGTVTPGVTPGRTPLRDKLNINTEEQLADPAYAKHLQRESREQL
KLGLMSLPVPKNDFEIVLPENAETELEEMETETGYMEDASEIELRKQAARDVEREKELKL
RHTAVQRTLPRPSEVNESILRPMGTDPLSELQQAEEMIKKEMITMLHFDCLHHPPANQQR
SKQRGPSSTSNNAEHIAHLDRHPYQPISNEDLAQASELLSQEMEVVRAGMGHGDLSMEAY
SQVWEECYGQVLYLSAQSRYTRANLASKKDRIDSLEKKLEINRGHMTCEARRAARLERRL
KVLLGGYQSRAVGLLKQHGELWEQVEQAATELHTFTELKKQEDTAIPRRQEALREDVERQ
QEREKELQQRYGDLLLEKEALLSAKF
NT seq 2421 nt   +upstreamnt  +downstreamnt
atgccgcgtatcatgatcaaggggggtgtatggcgaaacaccgaggatgagatcctgaag
gcggcggtgatgaaatatgggaagaaccagtggtctcgtattgcctccctgctgcaccgc
aagtctgccaaacagtgcaaggcccgctggtatgagtggttggatcccagcattaagaaa
actgagtggtccagagaggaagaggagaaactactacatctggccaagctgatgccgacc
cagtggaggaccattgctcctatcataggacgcaccgctgcccagtgtctggagcactac
gagttcctgctagacaaagcggctcagagggacaatgaggaggatacagctgacgatccc
aggaaactgaaacctggtgagatcgaccccaaccctgaaaccaagcccgctaggcctgac
cctgtggacatggatgaagatgagctggagatgctttctgaggccagagctcgtctggcc
aacactcaggggaagaaagctaagaggaaagccagagagaaacagctggaggaggccaga
cgtctcgctgctctacagaagcgcagggagttgagggccgcaggcatcaatgcccagaag
aagaggaagaagaagagaggagtggactacaatgctgagatcccttttgagaagaagcct
tctcagggattctatgacaccagcatggagctctacgaaggtctggaaccaaacttcaaa
cgcctgcgacaacaacacctggacggagagctacgcaatgaaaaggaagagaaggagagg
aagagggatagacagaagatcaagaagaagaaggagagtgatcttccatcagccatcctg
cagaccagcggagtagcagagttcaccaagaaacgcagcaaactggtgctgcctgcaccg
cagatctctgatgcggagctggaagaggtggtgaagctgggtcaggccagtgaagtggct
cgtcagaccgctgaggagtctgggatcactaactccgcctcctcagccctcctatcagaa
tacagcctcaccaacagtgctatggcaactgggctacgcacccccaagacccctgctgcg
caggacaagatcctacaggaggcccagaacctgatggctctaactaacgtagacactcct
ctgaaaggaggtctgaacactcctctccaccagagtgacttctcaggagtcacaccccaa
agacaggcagtacagacacctaatactgtactgaccacacctttcagaacccctggtccg
gggtcagagggcagtatgaccccccagggaggtttaacccctaaaggacccggtactgtt
acccctggagtaaccccgggacgcacccctctacgagacaaactcaacatcaatactgag
gaacaactagcagaccctgcctacgctaaacatctgcaacgagagtcgagggagcagctg
aagctgggtctgatgtcgctgccagtccctaagaatgactttgagattgttctaccagaa
aacgcagagactgaactggaggaaatggagacggagactggatacatggaggatgcctca
gagatagagctacgcaaacaggctgctcgggacgtagagagggagaaagagctgaagctg
agacacactgctgtacagaggactttacccagaccatcagaggtgaatgagtccatcctg
cgtccaatgggaacagatcctctgtcagarctgcagcaggctgaggagatgatcaagaag
gagatgatcaccatgctgcactttgactgtctacaccacccaccagccaaccaacagcgc
agcaaacaacgagggccttcctccacctccaacaacgcagaacacatcgcccacctggac
agacacccctaccagccaatcagcaatgaggatctggcacaggccagtgagttgctgagc
caggagatggaggtggtgagggcaggtatgggtcacggggacctgtccatggaggcctac
agccaggtgtgggaggagtgttacggccaggtgctgtacctctccgcccagagccgctac
accagggccaacctggcctccaagaaggacagaatagactccctggagaagaaactggag
ataaaccgaggccatatgacatgtgaggcccgccgtgctgctcgtctggagcgccgtctc
aaggtgttactaggagggtaccagtcccgtgctgtaggcctactgaagcagcatggtgaa
ctgtgggagcaggttgagcaggcagctacagagctccacaccttcactgagctgaagaaa
caagaagacacagctataccccgcagacaagaggctctaagggaggatgtggagagacag
caggagagagagaaggagctgcaacagagatatggagacctgctgctggagaaggaagct
ctgctgtctgccaaattctaa

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