Salvelinus sp. IW2-2015 (Arctic char): 111968647
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Entry
111968647 CDS
T05762
Name
(RefSeq) protein jagged-2 isoform X1
KO
K21635
jagged-2
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
111968647
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
EGF
MNNL
EGF_TEN
hEGF
EGF_2
DSL
EGF_DL_JAG
JAG1
EGF_Teneurin
JAG1-like_EGF2
EGF_CA
DUF1180
Motif
Other DBs
NCBI-GeneID:
111968647
NCBI-ProteinID:
XP_023850171
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Position
LG9:14956540..14988232
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AA seq
1251 aa
AA seq
DB search
MWNCMGMSNCLSIVCVLLTVWTEVSQSSGYFELQLIAVQNANGELSDGDCCDGERNTQDL
RCNSDECDTYFRVCLKEYQTDVTTRGLCIYGTGSTNVIGGNSFQFKSAKNNQNRNNDGGK
IVIPFQFAWPVSYTLIVDAWDWDNGTHSSSGEDLLIERSVRKERISSGDDRQTIQYNGLT
ASFEYSIRVRCDENYYGNKCNKLCRPRDDWHGHYVCDQFGNRGCMEGWMGTYCTTAICKQ
GCNLLQGFCSVPGECTCTYGWQGPFCDNCLPYPGCVHGTCVKPWQCTCEKNWGGLLCEKD
LNYCGTNKPCKNGGTCMNTEPDEYNCACPDGYSGKNCEIAEHACVSNPCANGGTCHEVPS
GFECHCPAGWAGPTCAKDTDECASNPCAQGGTCIDMENGFECLCLPRWAGKTCQIDVNEC
MGKPCLNAYSCKNLIGGYHCACFRGWAGQNCDINVNSCHGQCQNGATCKEGQRGYVCACS
PGFVGRHCDIQRNSCASGPCRNGGRCHTLLDSFMCECPHGYTGTTCELQSNPCSPNPCQN
KAQCHSLMDDFYCACPDDYEGKTCSELKDHCKTNPCEVIDSCTVAVATNGTKEGVWHISS
NVCGPHGRCISKPAGNFTCSCEPGFTGTYCHENINDCVPPPCKNGGTCIDGISSFKCFCP
DGWEGTLCDMDVNECSRSPCKNGGRCVDLLNHFYCQCQDSWKGKTCHSRESQCDSSTCSN
GGTCFDHGDTFRCTCLSGWGGSTCNTAKNSTCDSNPCENGGTCVGGGDAYTCICKDGWEG
PTCAHNANDCNPQPCYNGGVCVDGVNWFRCECAPGFAGPDCRINIDECQSSPCAYGSTCV
DEINSFLCVCPLGRTGPHCQEFIGIGKACRYSGLQFPHGSRWEEECNTCQCVNGIVRCSK
VRCGRRPCLLQRGGAGPDTSAPCPRGQECVEHQFLTCFAKPCHQWGVCSTPDPPPSLHTQ
CEPNSGYLDNSCARITLIFNRDKVPQGTTVENICSELRYLPIAQTLAKDCTLLILCDLSY
SNSDAVEVAMSYDQDGQEQNGDRGQIQEAASAIVGALSKRHNSTVMLAVVEVKVETQVMP
QSVDHLVPVLCVVFSVLWIFCIVVCVWWTRKRKKERERESAAEDSTVNNQLEPLRVSLPQ
HKDNRGKDIQHECKKLMSPPDRTCDGAEGDEEEDGEEEELRRGGMELDKFSTQKCSLAGV
QDKVMDKGGVICTTRSAPVKPPHRTAYSPKDNRCKNLNAANVSEDVKDHYV
NT seq
3756 nt
NT seq
+upstream
nt +downstream
nt
atgtggaattgtatggggatgtcgaattgcctgtcaatagtgtgtgttcttctgaccgtg
tggactgaggtgtcccagtcctcgggctattttgagctgcagctgattgcggtacagaac
gcaaatggtgagttgtcggacggggactgctgcgacggagaaaggaacacgcaggatctc
cgctgtaacagcgatgagtgtgatacgtacttcagagtgtgtctaaaggaataccaaacg
gatgtcacgaccaggggcttgtgcatctatggaactggatctactaacgttatcggtgga
aatagttttcaatttaagagcgccaaaaacaaccaaaaccgaaacaacgatggtggaaag
atcgtcatcccattccagttcgcttggccggtttcgtacactctgatcgtggacgcgtgg
gactgggacaatggtacacacagcagcagtggtgaggatctgttgattgagcgaagtgtc
cgtaaagagaggatcagctctggagatgatagacagactatccaatacaacggtcttaca
gccagctttgagtacagcatccgcgtgcgctgtgacgagaactactatggcaacaagtgc
aacaaactgtgccggccacgcgatgactggcatggccactacgtgtgtgaccagtttggg
aatagaggatgtatggagggctggatggggacttactgtacaactgctatctgcaagcag
ggctgcaacctgctgcaaggattctgcagtgtcccaggagaatgcacgtgtacgtacggg
tggcagggtccattctgtgacaactgcctgccatacccaggctgtgtccacgggacctgt
gtcaagccctggcagtgcacctgtgagaagaactggggaggcctgctgtgtgaaaaagat
ctgaactactgtgggacgaacaagccgtgtaagaacggaggaacgtgtatgaacacggag
ccagatgagtacaactgtgcctgtcctgacggctactcaggcaaaaactgtgagatagcg
gaacacgcctgtgtgtctaacccctgtgccaacgggggcacctgccacgaggtaccgtct
gggtttgagtgtcactgtcctgcaggctgggcagggcccacctgcgctaaagacacggac
gagtgtgcatccaacccttgtgctcagggtgggacctgcatcgacatggagaacggattt
gagtgcctctgcctcccacggtgggctgggaagacctgccagatagacgttaatgagtgt
atggggaagccttgcctcaatgcttactcttgcaaaaacttgattggtggatatcactgt
gcctgctttcgaggatgggccggccagaactgtgacatcaatgtcaacagctgccatgga
cagtgtcagaatggagcgacttgcaaggaggggcaaagaggctacgtgtgtgcctgctca
ccggggtttgtgggccggcattgtgacatccagaggaacagctgtgccagcggcccatgt
aggaacgggggcaggtgtcacaccctgctggacagcttcatgtgtgagtgcccacatggg
tacactggcaccacctgtgagctgcagagcaacccgtgcagccctaacccatgccagaac
aaggcccagtgtcacagtttgatggatgacttctactgtgcctgtcctgacgactatgag
ggcaagacctgctctgagctcaaggatcactgtaagacaaatccctgtgaagtgattgac
agttgtactgtcgccgtggccaccaatggcacaaaggaaggggtgtggcacatctcgtcc
aatgtgtgcggcccacacggacgctgcatcagcaagcctgctgggaacttcacctgctcc
tgtgaaccgggcttcactggaacatactgtcacgagaacataaacgactgtgtgccgcct
ccctgtaagaatggaggaacctgcattgatgggatcagctctttcaagtgcttttgccct
gacggctgggagggcacgctgtgtgacatggatgtgaatgagtgcagtaggagcccctgt
aagaacggaggtcgctgtgtggacctgctcaaccacttctactgtcagtgccaggacagc
tggaagggcaagacctgccactcacgtgagagccagtgtgactccagtacctgcagtaat
ggggggacgtgcttcgaccacggggacaccttccgctgtacctgtctctcagggtggggg
ggcagcacctgtaacacagccaagaacagcacgtgtgactctaacccgtgtgagaatgga
gggacctgtgtcggagggggtgatgcctacacctgcatctgcaaggatggctgggagggg
cccacatgtgctcacaatgcaaatgactgcaatcctcaaccttgctataacggtggtgtc
tgtgtggatggcgtgaactggttccgctgtgagtgtgccccgggatttgccggaccagac
tgccggatcaacatagatgagtgccagtcatcgccctgtgcctatggttctacctgtgtg
gatgagatcaacagcttcctctgtgtgtgtcccttgggccggactgggcctcactgccaa
gagttcatagggatcgggaaggcctgtcgttactccggcctgcagttccctcacggcagt
cgatgggaggaggagtgtaatacctgccagtgtgtcaacggcattgtgcgctgttctaag
gtacggtgtggccgacggccctgcctgctgcagagaggtggtgccggtccagacactagt
gccccgtgtcctagaggacaggaatgtgtggaacaccaattcctcacctgcttcgccaag
ccctgccaccagtggggcgtgtgttccacccccgacccccctccgtccctccacacccag
tgtgaacccaacagtggttacctggacaacagctgtgcccgcatcacactcatctttaac
agagacaaagttccacagggcaccactgtggagaacatctgctcggagctgaggtacctt
cccatcgcccagaccctggctaaagattgcacgctcctcattctctgtgacctgtcctac
tccaacagtgacgccgtggaggttgccatgtcgtatgatcaggatggtcaggagcagaat
ggagaccgtggtcagatccaggaggctgccagtgccatcgtcggtgccctgtccaaacgc
cacaacagcaccgtcatgctggccgtggtggaggtcaaagtggagacgcaggtcatgccc
cagtctgtggaccacctggtgccagtgctgtgcgtggtgttcagtgtgctgtggatcttc
tgtatcgtggtatgtgtgtggtggacccgtaagaggaagaaagagcgtgagagagagtct
gcagcagaggacagcaccgtcaacaaccagctggagccactgagggtcagcctgccacag
cacaaagacaaccgaggcaaagacattcagcacgaatgtaagaaactcatgagccctcca
gaccgaacgtgtgacggggctgagggagacgaggaggaggacggtgaggaggaggagctg
aggaggggagggatggagctagacaagttctccacccaaaagtgctccttggcaggagtg
caggacaaagtgatggacaaagggggagtgatctgtacgacgcgtagtgcccctgtcaaa
cccccccaccggacagcgtacagccccaaagacaaccggtgtaaaaacctcaacgctgcc
aacgtcagtgaagacgtcaaagaccattatgtatga
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