Salvelinus sp. IW2-2015 (Arctic char): 111968663
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Entry
111968663 CDS
T05762
Name
(RefSeq) CDK-activating kinase assembly factor MAT1-like isoform X1
KO
K10842
CDK-activating kinase assembly factor MAT1
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp03022
Basal transcription factors
salp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
111968663
09124 Replication and repair
03420 Nucleotide excision repair
111968663
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
salp03021
]
111968663
03400 DNA repair and recombination proteins [BR:
salp03400
]
111968663
Transcription machinery [BR:
salp03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
111968663
DNA repair and recombination proteins [BR:
salp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
111968663
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MAT1
DUF349
Motif
Other DBs
NCBI-GeneID:
111968663
NCBI-ProteinID:
XP_023850200
LinkDB
All DBs
Position
LG9:complement(15654060..15725524)
Genome browser
AA seq
203 aa
AA seq
DB search
MTIWSKWRRSVVPNPISSICPRSIEGKSVLVSWRAALHSAPVYNLTNNLEVEGTKHIMEA
YQRENRDIIQKNKAKLMREQEALLSLEELLLEDMLLEELLLLEEQGNEYRRLEDFQEEQR
QLQAKRKSKQALLDKLNALMSPPPSCWPNTRTGLPSWRPRLRSRNRWSKPPSSPPASLWY
LNHVRIAQPQDMAGGYNSGLVCH
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atgactatttggagcaagtggaggagatcggttgtgccgaatccgatttccagtatctgc
cctagatcaattgaagggaagtctgtgctagtgtcttggagggctgccctgcactctgct
ccagtctataacctgaccaacaaccttgaggtggagggcaccaaacacatcatggaggcg
taccagagagagaatagagacatcatccagaagaacaaggccaagctgatgcgagagcag
gaggcgctgctgtcgttggaggagctgttgttggaggacatgctgttggaggagctgctg
ttgttggaggagcaggggaacgagtatcgcaggctggaggatttccaggaggaacagaga
cagctacaggccaagaggaagagcaagcaggctctactagataaactgaacgctctcatg
tccccaccaccatcctgctggcccaacacaaggaccgggctgcccagctggagacccaga
ttgagaagcagaaacaggtggtcaaaaccaccatcttctccaccggcatccctatggtat
ctgaaccacgtgcgcattgcccagccccaggacatggctggaggatacaactcaggactt
gtgtgtcattga
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