Salvelinus sp. IW2-2015 (Arctic char): 111968838 Help Entry 111968838         CDS       T05762                                  Name (RefSeq) protein SCAF8   KO K13191   RNA-binding protein 16 Organism salp  Salvelinus sp. IW2-2015 (Arctic char) Brite KEGG Orthology (KO) [BR:salp00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:salp03021]     111968838    03041 Spliceosome [BR:salp03041]     111968838 Transcription machinery [BR:salp03021]  Eukaryotic type   RNA polymerase II system    Other transcription-related factors     Transcription termination factor      111968838 Spliceosome [BR:salp03041]  Other splicing related proteins   Spliceosome associated proteins (SAPs)    RNA binding proteins (RBPs)     111968838 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  CID RRM_1 CDC45 DUF3525 Motif Other DBs NCBI-GeneID:  111968838 NCBI-ProteinID:  XP_023850506 LinkDB All DBs Position LG9:22721491..22769953 Genome browser AA seq 1511 aa AA seqDB search MESVKAFNDELYSLNEYKPPISKAKMTNITKSAIKAIKYYKHVVQSVEKFVQKCKPEYKV PGLYVMDSIVRQSRHQFGQDKDVFAPRFSKNIIGTFQYFYRCPSDDKSKIVRVLNLWQKN AVFKSDIIQPLLDMAAGLPPPSVTPVMTSRDAPVNNATPGTPATPATPANIVSSLPDWAS QFSNTDTVAAVAQILQSPQGQQLQQLVQSLQMQQEKPQPSLLQALDAGLVVQLQALTAQL TAAASANPMQLNPLDQRVSSFNKKMLGHFDFGNDSERSEDSKKDSQSSQMPMVSDSIFHQ LAEQLQQQNLEQLQKQLMEHQQAPAEGTYQTHQNGIFGSENTPQQSSSQSQHPEPDNKMD DSIDNQQQDMDLDDGPEMGEEIFEPEDKKSKTIDIQSRTRSRSRSRSPRKRRSRSRSGSR KRKHRKRSRSRSRERKRKLSRSYSSERQALELEKERQKKGLPPIRSKFLSVCSTTLWVGQ VDKKATPQDLTNLFEEFGQIESINMIPPRGCAYICMVHRQDAYHARQKLSTGSYKIVSKV IKIAWALNKGVKQEYKQLWDMDLGVTYIPWEKVKLDDLDGFAEGGMIDQETVNAEWEAAK NAPQPVKEAVSQAVSAEPMAATNTQQTQQKAFIQQVSMMXVQLPVAQAVPAGGPVPPSFP VSMXMPPPGYGPPPTFLRAGFNASQPPPGFMQAAGVPQQAGMGSAPTSLVQPSMSHAQDS VKDSPYGATVPGSFMPSAIPGQGVFNPLQPGVQMQQAANDKTGQSADGMDAAAELVLQGM QNAMSRRMGLLGMHPSASLTHPLHQQGLPGQRMPGLMPLDLQPSMLQGAGARFPLLMQQG LSQQSILDASLHAQARARAASQMERFNRAEEAFNRGPNPPNESMSKAEDEPSSGADDSQQ GGDQDYRFPPPQEKQNMGLLRTPPPEHRESMGGGGRGGGAGGVGAGGGGMDGGGGRSALL QTPVREPARDSIVGRLQALAGFTPQTQSRWGPPRGNFDEHDMRGSPARVSKGFQEERPSS NQGQNFPNRFENRAGAGGVGAGVGGGPAWSRGGANAAAPFADADIPQDLDECRRPWDRQQ RERNDREFDLRKEMNGNRLERDSREKDRERERERDRERERDHDRERGNREREQECDRERE REKEREKDRERERERDRNKRGAWTPLLPLPQPLLPTPTPTPTLSLTQGKSQALLQLQSRL QPKPGLLTKPGLLQTPTLLTRSTSQAPTKFLQAPSQSPTQAKNEALPGPEPQTESQSSTQ THASPKSESSPQTQSSPXNQSSPQNLVSPQAQSPSPPQAQFPPLAQSPPQALSPPRAQTP PQALSPPLAQSPPQALSPLPAQSPPQALSPPPAQSPPQALSPPPAQSPPQAPSPHQEITD TQEEPDNALWANKPEKPQEEPIEEPEPIEEPPSQLVYGTGLRLNTDVVAEPTPERAPTPT LSPTPAPLSMSPVLTHRAEEPQCLPEPLDVQQPPQHASSSSSSSPKDNGLSEPMEEAEKQ PVVEQTDTEGT NT seq 4536 nt NT seq  +upstreamnt  +downstreamnt atggagtcagtcaaagcattcaacgacgagctctactctctgaatgagtacaaacctccg atctccaaggccaagatgaccaatattaccaagtctgcaataaaagcaataaaatactac aaacatgttgtccagagcgtggagaagttcgttcagaaatgcaagccagagtacaaggtc ccaggcctgtacgtcatggactccattgtgcggcagtcacggcaccagtttggccaggac aaggatgtgttcgccccgcgcttcagcaaaaacataatcggaaccttccagtacttctac cgctgcccctcagatgacaagagtaagattgtcagagtcctcaacctgtggcagaagaac gccgtcttcaagagtgacatcatccagccgttgctggacatggctgcaggactaccccct cccagtgtcacccctgtcatgaccagcagggatgctccggtcaacaacgctacgcctggt accccagcgaccccggccactccagccaacatcgtgtccagtctgcctgactgggcgtct cagttttccaacacagacactgtagctgctgtggcccagatcctgcagagtccacaggga caacagctccagcagctggtgcagagtctgcagatgcagcaggagaagccccagccttct ctgctgcaggcgctggatgcaggcctggtggtccagctgcaggccctgacagcccagctc actgctgcagcctcagccaaccccatgcagctcaaccccctggaccagagggtctcctcc ttcaacaagaaaatgttgggtcattttgactttgggaatgattcagaacgctctgaagac tccaaaaaggactcgcaatcatcccagatgcccatggtgtcagactccatcttccaccag ctggctgagcagctgcagcagcagaacctagagcagttacagaagcagctcatggagcac cagcaagcaccagcagaaggtacctaccaaacacatcagaatggaatctttgggtctgag aacacaccccagcagagcagtagccaatcacagcacccggagccagacaacaagatggat gactccattgacaaccagcagcaggacatggacctggatgacgggccagagatgggcgaa gagatcttcgagccagaggacaagaagtccaagacgattgacatacagtcaagaacacgg tccaggtcacgatcaagatctcccaggaagagacggtccagatcacggtcaggctctcgg aaacggaaacatcgcaagcgatcgcggtcacgctccagagaacggaagaggaagttgtcg cggtcctactccagcgagagacaagccctcgagctagagaaagagcgtcagaagaaagga ctgcctccaatccgatccaagtttctcagtgtgtgcagcaccactctgtgggtgggacag gtagacaagaaggctactccgcaggacctcaccaatctgtttgaagagtttggtcagatt gagtctatcaatatgatccctccccgtggctgtgcctacatctgtatggtccacagacag gatgcctaccacgccagacagaaactcagcactggttcatacaagattgtctccaaggtc attaagatcgcttgggcgctgaataagggagtgaagcaggagtataagcagttgtgggac atggacctgggggtgacctacattccctgggagaaggtcaagctggacgacctggacggc ttcgctgagggaggcatgatcgaccaggagactgtcaacgccgagtgggaagcagccaaa aatgcaccacagccagtgaaggaagcggtgagccaggctgttagcgctgaacccatggca gccactaatacccaacagacccaacaaaaggccttcatccaacaagtctccatgatgcmt gtgcagctccctgtggcccaggctgtccctgctgggggtcctgtgcctccatccttccct gtttccatgrcaatgcccccgccaggctatggccccccgcccaccttcctcagagcaggg ttcaacgcctcccagcctcctccaggtttcatgcaggcagcaggtgttcctcagcaagca ggcatgggctcagctcctacatctctggtgcagccctccatgtcgcatgctcaagacagt gtgaaggactccccgtacggagccactgtcccaggaagcttcatgccctctgccatccct ggacaaggggtcttcaacccgcttcaacctggagtccagatgcagcaagcagccaatgac aagacgggccaatctgctgatggcatggaygctgctgcagagttagtactgcaaggtatg caaaatgcaatgagtcgtcgtatgggtcttctggggatgcacccctcagcctccctcacc caccccctacaccagcagggcctgcctggccagaggatgcckgggctaatgccgctggac ctccagcctagtatgctccagggagccggggcccgcttccccctcctgatgcagcagggc ctgtcccaacagagcatcctggatgcctctctccatgcacaggcccgcgccagagcggcc tcccagatggaacgcttcaacagggccgaggaggccttcaaccgggggcccaacccccca aacgaaagcatgtccaaggctgaggacgagccttcctctggagctgatgatagccagcag gggggggaccaagactaccgcttccccccgccccaggagaagcagaacatgggcctgctg agaacacctcccccggagcacagagagtccatgggtggaggtggacgtggtgggggagct ggtggtgtgggagctggtggtgggggtatggacggaggaggaggcagatctgccctgctc cagaccccagtgagggagccagctagagacagcatagtagggcggcttcaggccctcgcc ggcttcaccccccagacccagagtcgctgggggccacctagagggaactttgatgagcat gacatgcggggctcaccggccagggtctccaagggcttccaggaggagcgccctagctcc aaccaggggcagaactttcccaaccgctttgagaaccgcgctggggcaggaggagtaggt gctggtgttggaggtggcccggcgtggagtcgtggtggagctaatgctgcagcaccgttc gctgatgctgacataccacaggacttggatgagtgccggcgcccttgggacaggcagcaa cgggagaggaacgacagggaatttgacttaaggaaggagatgaacggaaaccgccttgag agagatagccgcgagaaagaccgggagagggagagagagagggaccgggagagagaaagg gaccatgaccgtgagcgtggcaaccgtgaacgagagcaagagtgcgatcgggagagagag cgtgaaaaggagagggagaaggatcgggagagagaacgtgagcgggaccgtaacaagcgt ggagcctggacacctcttctccctctaccacaacccctacttcctactcctaccccaacc ccaaccctctccctgacccaaggcaaatcccaggccctgctgcaactacagtccaggctt caacctaaacctggactcctaactaaaccaggtctgcttcaaactccaaccctcctaact cggtcaacatctcaagccccaaccaagttccttcaagccccatcccagtctccaactcaa gccaagaatgaagccctccctgggcctgagccccagacagagtcccagtcctctacccag acccatgcttcccccaagtctgagtcctcaccccagacccaatcctctcctcmgaaccag tcatcaccccaaaacctggtttcccctcaggcccaatcgccatcccctccccaggctcag ttcccgccactggcacagtccccaccccaggccctgtccccaccacgggcacaaacgcca ccacaggccctgtccccaccactggcacagtcgcctccccaggccctgtccccactaccg gcacagtcgcctccccaggccctgtccccaccaccggcacagtcgcccccccaggccctg tccccaccaccggcacagtcgcccccccaggccccgtcgccacaccaggagatcactgac acccaggaagagccagataatgccctttgggccaacaagccagagaaaccccaggaagaa cccatagaagagcctgaacccatagaggaacctccatctcagttggtctatgggacgggg ttgaggctgaacactgacgtagtggctgagcccacacctgaacgggcgcccacccctacc ctctcccccactcctgccccactctcaatgtcaccggtcctcacacaccgcgctgaggaa ccccaatgcctgccggagcccctggacgtgcagcaaccaccacagcatgcctcctcctcc tcttcctcctcccctaaggacaatggactgagtgagccgatggaggaagctgagaaacag ccagtggtagagcaaactgacactgaggggacataa

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