Salvelinus sp. IW2-2015 (Arctic char): 111968840
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Entry
111968840 CDS
T05762
Name
(RefSeq) AT-rich interactive domain-containing protein 1B-like
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
111968840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
salp03000
]
111968840
03021 Transcription machinery [BR:
salp03021
]
111968840
03036 Chromosome and associated proteins [BR:
salp03036
]
111968840
Transcription factors [BR:
salp03000
]
Eukaryotic type
Helix-turn-helix
ARID
111968840
Transcription machinery [BR:
salp03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
111968840
Chromosome and associated proteins [BR:
salp03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
111968840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
111968840
NCBI-ProteinID:
XP_023850507
LinkDB
All DBs
Position
LG9:22994689..23350084
Genome browser
AA seq
1784 aa
AA seq
DB search
MGLISQDRPSSLPDLSGSIDDLPTGTEAGHSSAISATGSTSSQGEQSNPAQSPFSPHASP
HLSGQGSGPSSSPVGSPVGSNQSRSGSGPISPVSGPTTAPGSQMAPQTPGNMLDVPHPPL
SQSPMPQERGFMSNMQRNPSGSQFAPAPQSGPSMSPHPSPGPGGQMYPGMGPYPHGGSSG
PYGPQGSQANQYGPQGNYPRPPNYGGTPGANYSSPGPGPGMTNSQGMNASSPMHGQGPGQ
PMGRSPGAGSRPYPNMAPSSPSMPQPAGPGMGPPSLGNVNRKAQEAAAAVMQAAANSVQG
RQGSYPGPGMNLMGTAGSGAPYNQSPGNNSGMGTPQGPPYNMPPSGAVGMSVSGMMNPDG
KQKTGGKEENMPTNEPPKLKDGHSGSQCVSQPTTPGAMLVPSPLSPSPASLSSYHGDDSD
SISSPVWPKTPSSPKLNSSTMTSERITRLYDMGGEPERRGWVDRYLSFMEERGTPVPQLP
AVGKKPLDLCRLYMAVREIGGLAMVNKNKKWRELSTNLSVGTSSSSASCLKKQYIQYLFA
YECKVERGEDPPDDSNTGTGGENRKQAKVQPPSPANSGSLQGPQTPQSSGSSSMAEMSGD
LKPPTPATTPQGQVTPIPASRSSVVSVQDPFSEVSDPVFQKRNSLPLGGSGGVYQQGVNM
PPNMMMRMQYEKDPFVGMRKVAGGEPYMPGQMTSGGIQDMYGRSTSGMGQRSQYPYGPGY
DRRPDHLMGMEGSMGPPGNQSNMGPSNSEGSIYSPNRYPSQQRHEGYVQQYPGMSYGMHP
SGMYPHQQRPMEGMYGSPGKRHEGEMYSPPAKRHEGEMYGPPAKRHEGEMYGAPAKRHEG
EMYGPPTKRHEGEMYAMQYRGQQPDMYNHYTTGYSGPERRPMQGQFPYPSPYSRERMQAS
GQGQHPQHPMGPQMMSGGPPSNNGVEGPQGPNMWPSRTDMGYPYPNRQGAPSQVPPYGPM
GRGDDLEGRPIQDGQWLGHGGHRQSSYMSGGMTPMSSRQPPSAYQTSPSMANHLPRAPSP
GSFQRSMEARMSPNKAVFMGSMKMPGKPGMPIPGQGNGHPGQVAPNLLRDLNYPLGSVEA
TMPVFKPRRKITSKDTGTPEAWRVMMSLKSGLLGESTWALDTINILLYDDRSVASFTLTQ
LPGFLELIVEYFRRCVMEIFGILEEYEIGTIGQKTLLGAEACDQGEELTSEPEIDCEASQ
PEPEQEQEVEGGETEKGEVEKREEKPVDITEKITTEGMSPPSATEPAPEGTKEESEAEMK
VKKEEGEKEEEGEKEEDGEKEKGKENEESEKPTESKEASAESKEDSPYQAPSEHEPRPQQ
ASKYDKFPVKILHKEDLIEDMTEQLGHVTEFTSGLLHWQAGGGDSTAHIQAHFECRGEHP
DRMEGERKECASLNKEQDTEGGKQTEKGITATIDDILCARLGALSEGHPTHSAPTYPFRL
HQGGGHQHITLLEDEPRCLDEAPLSTSSPWQDSLAKRCLCVSNIIRSLSFIPGNDSDMSR
HPGLVLILGRLLLLQHQHPERKRTPPSYQREEVQERGLACSKDEWWWNCLATLRENTLVT
LANISGQLDLSLYPETICLPILNGLLHWMVCPSAEAQDPFPSGTPHSPLTPQRLVLECLC
KLSIQDNNVDLLLATPPFSRQEKMYATLVRYVGQRKNQVYREMAVATLSNLAQGDSTAAR
AIAIQKNSVGNLMGFLEDGVSMAQYQQNPHSMLHMAHHPPMEPPSINMMCRAAKALLAMA
KVEENRPEFVLYEGRILDISISSVLNQGVTSIICEVLFQFVKKL
NT seq
5355 nt
NT seq
+upstream
nt +downstream
nt
atgggtctgatctcgcaggaccgcccctccagcctcccggacctgtctggctccatagat
gacctccctacaggtacagaggctggtcacagttcagccatcagtgctacaggctccacc
agtagccagggggagcagagtaacccagcccagtcacccttctcaccccacgcgtcaccc
cacctgtctggtcaaggcagcggcccatcgtcctctcctgttgggtcccctgtgggctcc
aaccaatcacgctccggctctggccccatctcccctgtcagcggcccaaccacagcacca
ggttcccagatggccccccagactcctggcaacatgttggatgttccccacccccccttg
tcccagtcccccatgcctcaggaaaggggctttatgtccaacatgcagagaaacccgtct
ggctcccagtttgcaccagcacctcaatcggggccctccatgtcccctcacccctctcct
ggtcctgggggacagatgtacccagggatggggccctacccccatggtggctccagtggc
ccctatggaccccagggatcccaggcaaaccagtatggaccccaaggaaactacccacgt
ccacccaactacggcgggacccccggtgccaactacagcagccccgggcccggccctggc
atgacaaacagccagggtatgaatgccagcagccccatgcacggccagggtcccgggcag
cctatgggccgcagtcctggtgcgggcagccgcccctaccccaacatggctcccagctcc
cccagtatgccccagccagccggccctgggatgggccctccttcactgggcaatgtcaac
cgcaaggcccaggaggcagcagccgccgtcatgcaggccgcagctaactctgtacagggc
agacagggcagctacccaggccctggcatgaacctgatgggaacagcaggatctggagcc
ccctacaaccagtcaccaggcaacaactcaggcatgggcacaccacagggtccgccctac
aacatgccaccctcaggggccgtggggatgtctgtgagtgggatgatgaatcctgatggg
aagcagaaaacaggtggcaaggaggagaacatgcccaccaatgaacctccaaaactaaag
gatgggcacagtggatcccagtgtgtctcccagcccaccacccctggtgccatgcttgtc
ccctctcccctgtcccccagcccagccagcctgtcctcctaccatggggatgacagcgac
agcatcagcagccccgtctggccaaagactccctccagccctaagctcaactcgtccacc
atgactagcgaacgaatcacgcgcctgtatgatatgggtggggagccggagaggcgtggc
tgggtggaccggtacctgtctttcatggaggagaggggtacacctgtcccccaacttccc
gccgtgggcaagaagcccctggacctctgcagactctacatggctgtcagggagataggg
ggcctggccatggtgaacaagaacaagaagtggcgtgagctgtccaccaatctgagtgtt
ggtacctccagtagctccgccagctgtctgaagaagcagtacatccagtacctgtttgcc
tatgagtgtaaggtggagcgaggagaggacccgccggacgacagcaacactgggactggg
ggggaaaacaggaagcaggccaaggtgcagccgccctctcctgctaactcagggtccctt
cagggcccccagaccccccagtcatcaggcagcagctccatggcagagatgtcaggtgac
ctgaagcctcccaccccagccaccaccccccagggacaggtcacccccatcccagccagc
aggagcagtgttgtgagtgtgcaggacccgttctctgaggtgagcgacccggtcttccag
aagcgtaactccctccccctggggggctctgggggtgtgtaccagcagggggtcaacatg
ccccctaacatgatgatgaggatgcagtacgagaaggaccccttcgttggcatgagaaag
gtggcaggaggggagccctacatgccaggccagatgaccagtggtggcatacaggatatg
tatggcaggtctacatcaggcatgggccagcgctcccagtacccatatggaccaggctac
gacaggagaccagaccatctgatggggatggaggggagcatgggcccccccgggaaccag
agcaacatgggaccttccaacagcgagggcagcatttactctcccaacagatacccctcc
cagcagagacacgaaggctacgtgcagcagtaccctggcatgtcatatggaatgcacccc
tcagggatgtaccctcatcaacagcgccccatggagggcatgtacgggtccccaggcaag
agacatgagggggagatgtacagccccccagcaaagagacatgagggggagatgtacggc
cccccagcaaagaggcatgagggggagatgtacggcgccccagcaaagagacatgagggg
gagatgtacggcccaccaacaaagagacatgagggggagatgtatgccatgcagtatagg
ggccagcagcctgacatgtacaaccactacaccactggttactctggacctgagaggagg
cccatgcagggccagttcccctacccttccccctatagccgagagcgcatgcaggcctct
ggccaggggcagcacccccagcaccccatgggcccccagatgatgtccggggggccaccc
tctaacaacggagtggaaggaccccaggggcccaacatgtggccctccaggacagacatg
ggttatccctaccccaacagacagggggcaccctctcaggtaccgccatacggtcctatg
gggagaggagatgatttggagggccgacccatccaggatggtcagtggcttgggcacgga
ggccatcgccagtcctcctacatgtcaggtggtatgacccccatgtcctcccgccagccc
ccctctgcataccagacctccccctccatggccaaccacctgccccgagcccccagcccc
ggctccttccagcgctccatggaggcacgcatgtcccccaacaaagctgtctttatgggc
tccatgaagatgccaggcaaaccagggatgcccataccagggcagggtaatgggcaccca
ggccaagtcgcacctaacctgctaagagatctcaactaccctctaggatctgtagaggcc
accatgcccgttttcaagccacgtcgcaaaattacctcaaaagacactggaaccccagag
gcgtggcgagtgatgatgtctctgaagtcaggtctgctgggtgagagtacgtgggccctg
gacaccatcaacatcctgctgtatgatgacagatctgtggcctccttcaccctcacacag
ttgcctggcttcctggagctgatagtggagtacttcagacgctgtgtgatggagatcttt
ggcatcctggaggagtatgagatagggaccatcggccagaagaccctccttggggctgaa
gcctgtgaccagggggaggagctgacctctgaacctgagatagactgtgaggccagccaa
ccagagcctgagcaggagcaggaggtggaggggggggagacggagaagggggaagtagaa
aagagggaggagaaacctgttgacatcacagagaaaattacaacggaagggatgtcaccc
cccagtgcaacggaaccagcccctgagggaacgaaggaggaatctgaagccgagatgaag
gtaaagaaggaggagggggagaaagaagaggagggggagaaagaagaggatggggagaaa
gaaaaggggaaagagaatgaggagagtgaaaagccaaccgagagtaaggaagcctcagct
gaaagtaaggaagactctccttatcaggctccttcagagcacgagccaaggccacaacag
gccagcaagtacgataaattccccgtcaagatcctgcacaaagaggacctgattgaggac
atgacagagcagctgggccacgtgacagagttcactagcggactgctccactggcaggca
ggcgggggtgattccaccgcccacatccaggcccactttgagtgcaggggagagcaccct
gacaggatggagggagagagaaaggaatgtgccagtctcaataaagaacaggacacagag
gggggaaagcagacagagaagggtatcactgccaccatcgatgatatactgtgtgcccgg
ttaggggctttgtcagagggccaccctacccactctgcccccacctaccccttcagactg
caccagggagggggccaccagcacatcaccctgctagaggacgagccccgctgtctggac
gaggctcccctctccacgtcctccccctggcaggactccctggccaaacgctgcctctgt
gtgtccaacatcattcgcagcctctccttcattcctgggaacgactcagacatgtcccgt
cacccaggcctggtgctgatcctgggcagactgctgctgctacagcaccagcacccagag
aggaagaggacgccccctagctaccagagagaggaggtgcaggagcggggcctggcctgc
agtaaggacgagtggtggtggaactgtctcgctacactcagggagaacaccttggtcact
ctggctaacatctctggccagctggacctgtccctctaccctgagaccatctgcctgccc
attctgaacggcctgctccactggatggtgtgtccctctgccgaggcccaggaccccttc
ccctcaggcaccccccactcgcccctcaccccccagagactggtgctggagtgcctgtgc
aagctgagcattcaggacaacaacgtggacctgctgctggccacgccgcccttcagccgc
caggagaagatgtacgccaccctggtgcgctacgtgggccagcgtaagaaccaggtgtac
cgcgagatggccgtggccaccctatccaacctggctcaaggagactctacggcagcacgt
gccatcgccatacagaagaatagtgtgggtaacctgatgggcttcctggaggatggagtg
agcatggcccagtaccagcagaacccccacagcatgctgcacatggcccaccaccccccc
atggagccccccagcattaacatgatgtgtcgggctgccaaagctctgctggctatggcc
aaggtggaggagaacaggccagagtttgtcctgtatgagggacgaatcctggacatctcc
atctcctctgtgctcaaccaaggggtgaccagcatcatatgtgaagtactttttcagttt
gtaaaaaaattatga
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integrated database retrieval system
