Salvelinus sp. IW2-2015 (Arctic char): 111968895
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Entry
111968895 CDS
T05762
Name
(RefSeq) LOW QUALITY PROTEIN: transcription factor Sox-11
KO
K09268
transcription factor SOX11/12 (SOX group C)
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
salp03000
]
111968895
Transcription factors [BR:
salp03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
111968895
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
111968895
NCBI-ProteinID:
XP_023850611
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Position
LG9:complement(28017900..28020723)
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AA seq
339 aa
AA seq
DB search
MVQHTDNSETEGTMSREATDSEESEFIACSPVQINPDWCKTATGHIKRPMNAFMVWSKIE
RRKIMEQSPDMHNAEISKRLGKRWKMLKDSEKIPFIREAERLRLKHMADYPDYKYRPKKK
PKLDSSKPSAPSPEKSCSKMAKTSGKKCSKIKTKTHSKLSHRYGDDCVFPKVTKTIKSEL
TDDDDDDEYEEDYRMRIKQEDEEQMRPYNVAKVPTSPTLSSSAESEGTSMYEDIRNAAPN
RLFYNFKNSTKQSTMYPASASPASSRSVSTSSSSSEDADDLLFDFSLNFAPNAQGPEVGN
PNSGNLSLSLVDKDLDSFSEGSLALTLNFQTIAHQSSVK
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atggtgcagcacaccgacaacagcgagacggagggcaccatgtccagggaggctaccgat
tcagaggagagtgaatttattgcttgcagccccgtgcagataaacccagactggtgcaag
acagcaaccggccacataaagagaccaatgaatgcattcatggtttggtccaaaattgaa
aggagaaagatcatggagcagtccccggacatgcataacgccgagatttccaaaaggctg
gggaaaagatggaagatgctaaaggacagtgaaaagattcccttcatcagggaagcggag
aggctccggttaaaacacatggctgattatcctgattacaagtatagacccaagaaaaaa
ccaaagctcgacagttcaaaaccatcagcaccatctccggagaaatcttgcagcaaaatg
gcaaagacttccggtaagaaatgctccaaaataaagactaagacccattctaaattgtct
caccgctacggggatgactgtgtgttcccaaaagttacaaagacaattaaaagtgaactc
acagatgatgatgacgatgatgaatacgaggaggactatcgtatgcggattaaacaggag
gacgaggagcagatgaggccgtataatgtagcaaaagttcccacgagcccaacattgagc
tcctctgctgagtccgagggaaccagcatgtatgaagacatacggaatgcggctccgaac
agactgttttacaatttcaaaaacagtactaaacagagcacaatgtacccagcatccgcc
tcaccagcatcttctaggtcagtttcaacatcttccagctccagtgaggacgcggacgac
ttgctttttgacttcagtttaaatttcgccccgaacgctcaagggccggaggtgggcaac
ccgaattcaggaaatctctccctctctcttgtggataaagatttggactcattcagcgag
ggcagtctggctctcactttgaatttccagactattgcacaccagagctcagtgaaatga
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