Salvelinus sp. IW2-2015 (Arctic char): 111968927
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Entry
111968927 CDS
T05762
Name
(RefSeq) platelet-activating factor receptor
KO
K04279
platelet-activating factor receptor
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04020
Calcium signaling pathway
salp04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
111968927
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
111968927
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
salp04030
]
111968927
G protein-coupled receptors [BR:
salp04030
]
Rhodopsin family
Others
Platelet activating factor
111968927
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GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srv
7TM_GPCR_Srx
Bac_export_2
DUF3382
Motif
Other DBs
NCBI-GeneID:
111968927
NCBI-ProteinID:
XP_023850671
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Position
LG9:29863360..29867192
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AA seq
388 aa
AA seq
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MELLALAEPTVESTMEMEEDMTVNTTVKQSTVDKITFLDSEFRYTLFPVFYGVVFALGLI
ANSYVLFVLQRLRHAKAMSEIRIYMANLTVADLLFVCALPFWIGYYHHRGDWRYGDFLCR
VTGAFFFINTYCSILFLAAISVNRYWAITRPLDAASSDHWRRGVAVTMVIWALTLSMSVP
YLLETGIQVDDGNVSRCFEGYHNKTDDEKRTVATTHLIIVGCFVLVFFLVVVCNLLIARA
LLTQSPTQTRGSSSSQLRGVKGQALHMLCAVVGVFVVCFLPHHVVQGPWTLAVLEIKEGW
GRMDWGQRTRQWLNDAHQVTLMLMGLNCLLDPVVYCFATRKFRLYIKDHLKKVGRGKGCS
ETAITHISMVECKNVSQRLHSEQKQLKV
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atggagttgcttgctttagcagaaccaacagtggagtcgaccatggagatggaagaggac
atgacagtgaacacgacagtgaaacaatcgacagtcgataaaataacctttctggactct
gagttccgttacaccctcttcccagtgttttacggtgttgtgttcgcccttggtctgata
gccaacagttacgtgctgttcgtgctgcagcgcctgcgccacgccaaggccatgagcgag
atccgcatctacatggccaacctgactgttgccgacctcctcttcgtgtgcgccctcccc
ttctggattggctactaccaccaccgcggtgactggcgctacggcgacttcctgtgccgc
gtcaccggcgcgttcttcttcatcaacacctactgctccatcctcttcctcgccgccatc
agcgtcaaccgttactgggccatcacgcgcccgcttgatgccgcctcgtctgaccattgg
cgccgcggagtggctgtcaccatggtaatctgggcgctcactctgtccatgtccgtgccg
tacctcttggagacgggcatccaggtggacgacggaaacgtgtcgcgctgctttgagggc
taccacaacaagactgacgacgagaagcggactgtggccaccacccacctcatcatcgtg
gggtgcttcgtcttggtcttcttcctcgtagtagtctgtaacctgctcatcgcccgtgcc
ctgctcacacagtcccctacccagactcggggctccagttcatcycagctccggggggtt
aagggccaggccctgcatatgctgtgtgccgtggtgggggtgttcgtggtgtgcttcctc
ccccaccacgtggtccagggcccctggactctggctgtactggagatcaaggagggctgg
ggcagaatggactggggccagcggaccaggcagtggcttaacgatgcccaccaggtcacc
ttgatgctgatggggctcaactgcctcctggaccctgtagtgtactgcttcgccaccagg
aagttccgcctctacatcaaggaccatctgaaaaaggtggggagggggaaaggatgctcg
gaaacagccatcacacacatttctatggtggagtgcaagaatgtgagccagcggctccat
agcgaacagaagcagctcaaggtttaa
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