Salvelinus sp. IW2-2015 (Arctic char): 111969152
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Entry
111969152 CDS
T05762
Name
(RefSeq) red-sensitive opsin-2
KO
K04251
long/medium wavelength-sensitive opsin
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
salp04030
]
111969152
G protein-coupled receptors [BR:
salp04030
]
Rhodopsin family
Vision
Opsin
111969152
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GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srw
7TM_GPCR_Srv
TctB
7tm_4
Motif
Other DBs
NCBI-GeneID:
111969152
NCBI-ProteinID:
XP_023850860
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Position
LG1:48851190..48855694
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AA seq
353 aa
AA seq
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MAELGVFAARRHDDTTRDSGFAYTNSNNTKDPFEGPNYHIAPRWVYNLSTLWMIFVVIAS
VFTNGLVLVATAKFKKLQHPLNWILVNLAIADIGETLLASTISVCNQIFGYFILGHPMCV
FEGYTVSVCGIAALWSLAVISWERWVVVCKPFGNVKFDGKWAMGGIIFSWVWAAFWCAPP
IFGWSRYWPHGLKTSCGPDVFGGNEDPGVKSYMITLMITCCFFPLFVIIFCYIFVWLAIR
AVAAQQKDSESTQKAEKEVSRMVVVMIIAFCVCWGPYTCFACFSAANPGYAFHPLAAALP
AYFAKSATIYNPVIYVFMNKQFRSCIMQLFGKEEDDGSEVSTSKTEVSTVAPA
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atggcagagctaggagtgtttgctgccaggcggcacgacgatacaacgagagattcaggt
ttcgcctacaccaacagcaataacaccaaagatccttttgagggccccaactaccacatt
gctccaagatgggtgtacaatctctcaacactttggatgatctttgtggtcattgcctca
gtcttcaccaatggcctggtactggtggccactgcaaaattcaagaagctccaacaccct
ctgaactggatcttggtcaaccttgctattgctgacattggagaaacacttttggcaagc
accatcagcgtttgcaaccagatttttggctacttcattctgggacatccaatgtgtgtc
tttgagggatacactgtgtctgtgtgtggtattgctgctctgtggtccctggctgtcatc
tcttgggagagatgggtggtggtgtgcaagccctttggaaatgtcaagtttgatggcaaa
tgggccatgggaggcattatcttctcctgggtctgggctgctttctggtgtgcccccccc
atctttggctggagcaggtactggcctcacggcctgaagacttcctgcggacctgatgtg
ttcggaggcaatgaggatcctggagtcaagtcctacatgattactctcatgattacatgc
tgcttcttcccgctgttcgtgatcatcttctgctacattttcgtgtggctagccattcgt
gctgttgctgcgcagcagaaagactctgagtcaacacagaaggctgagaaggaagtgtcc
aggatggttgttgtcatgattatagctttctgtgtatgttggggaccttatacctgcttt
gcctgcttttctgcggctaaccctgggtatgctttccaccctctggctgctgcactgcct
gcctactttgccaagagcgccaccatctacaatccagttatctatgtcttcatgaacaaa
cagttccgttcttgcatcatgcagctctttggcaaggaggaagatgatggctctgaagtg
tctacatcaaaaacagaggtttccactgtggcacctgcataa
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