Salvelinus sp. IW2-2015 (Arctic char): 111969225
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Entry
111969225 CDS
T05762
Name
(RefSeq) autophagy-related protein 13 isoform X1
KO
K08331
autophagy-related protein 13
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04136
Autophagy - other
salp04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
111969225
04136 Autophagy - other
111969225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
salp04131
]
111969225
03029 Mitochondrial biogenesis [BR:
salp03029
]
111969225
Membrane trafficking [BR:
salp04131
]
Autophagy
Autophagosome formation proteins
ULK complex
111969225
Atg1 complex
111969225
Mitochondrial biogenesis [BR:
salp03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
111969225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
111969225
NCBI-ProteinID:
XP_023850997
LinkDB
All DBs
Position
LG10:6983802..7005626
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AA seq
516 aa
AA seq
DB search
MMDSDLSPQDKKDLDKFIKFFALKTVQVIVQARLGEKVCTRSLSSPTGSDWFNLAIKDIP
EVTHESKKALAGQLPGIGRSMCVEISLKTSEGDSMELETWCLEMNEKCDKDIKVSYTVYN
RMSLLLKSLLAITRVTPAYKLSRKQGHDYVILYRIYFGEVQLTGLGEGFQTVRVGVVGTP
IGTITLSCAYRTNLAFMSTRQFERTAPIMGIIIDHFVERPFGNMGHMHPCNYRAPGEDEG
AYNGVEDSQEVCTTSFSTSPPSQLYCSRLSYQSPVLVGAADFCHPSTLNAANPHQVTTQM
GVPGKEGGVPQKVPVQPCHGAQAEHRRVSSCPPSDHVPATPSSSGEDAETSSRSVEVKSG
SPCGVLETTFTRKVGAFVNKPGTQVTTASLDLPFAAFAPRAYDLEENDPMVQPPGSSATS
SPLQGSLHSQGSGESGGPAQDDFVMVDFKPAFSKDDLLPMDLGTFYREFQNPPQLTSLTI
DVSSQSMAEDLDSLPEKLAVYEKNIDEFDAFVDTLQ
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgatggacagtgatctaagtcctcaggataaaaaagacttggacaagttcataaagttt
ttcgctttgaagacagtacaggtgatagtccaagctcgacttggggaaaaagtatgcaca
cgctccttgtcttcacctactggctctgattggttcaacctggcaatcaaagatatccca
gaagttacacatgagtcaaagaaagctctggccgggcagcttcctggcatcggacggtcc
atgtgtgttgagatctccctcaaaacctcagagggagactcgatggaattggagacatgg
tgtctcgaaatgaacgagaagtgtgacaaagatattaaggtgtcctacactgtctataac
cgcatgtcattactgctcaagtcactactggctatcacaagggtaaccccagcctacaaa
ctctcacgaaagcaagggcatgactatgtcatactgtacaggatatattttggagaggtt
caacttacaggattgggagaagggttccagacagtgcgtgtaggagttgtgggaactcct
attggaaccatcaccttatcttgtgcttacaggacaaacctggccttcatgtccaccagg
cagtttgagaggacggctccgattatgggcataatcattgaccacttcgttgagcgcccc
tttggcaacatgggacacatgcatccatgtaactacagagcacccggggaagatgaagga
gcatacaatggggtggaggattctcaggaagtgtgcaccacgtccttctccacttctcca
ccctcacaactctactgctctcgtctttcttatcagtctcctgtgcttgttggagctgct
gacttctgccacccctccaccttaaacgctgccaacccacaccaggtaaccacccaaatg
ggagttccagggaaggaggggggcgtaccccagaaggtgcctgtgcagccttgtcacgga
gcccaggcagagcatcgacgagtgtcctcatgccccccttctgatcatgttcccgccacg
ccctccagcagtggtgaggacgcagagacctcgtcgaggagcgttgaggtgaagagtggc
tctccttgtggtgtactggagaccaccttcaccaggaaagtgggtgcctttgtcaacaag
ccaggcacacaggtaaccacagcaagcctggacttaccatttgcagcgtttgctcccaga
gcttatgacctcgaggaaaatgaccctatggttcagccgccggggtcctcagccacgtcc
tctcccctgcagggcagtttgcactcccaaggctctggtgagagtggaggcccggcacag
gacgactttgttatggtggactttaagcctgcgttctccaaggatgacctccttcccatg
gaccttggcacattctacagagagttccagaaccccccacagctcaccagcctcactatt
gatgtcagttctcagtccatggcagaggacctggactctcttcctgaaaaactggcagta
tacgagaagaacattgatgaatttgatgcatttgtggacacattgcagtag
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