Salvelinus sp. IW2-2015 (Arctic char): 111969297
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Entry
111969297 CDS
T05762
Name
(RefSeq) B-cadherin-like
KO
K05689
cadherin 1, type 1, E-cadherin
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04371
Apelin signaling pathway
salp04514
Cell adhesion molecules
salp04520
Adherens junction
salp05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
111969297
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
111969297
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
111969297
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
111969297
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
salp03036
]
111969297
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
salp04515
]
111969297
04090 CD molecules [BR:
salp04090
]
111969297
Chromosome and associated proteins [BR:
salp03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
111969297
Cell adhesion molecules [BR:
salp04515
]
Cadherins
Major cadherins
111969297
CD molecules [BR:
salp04090
]
Proteins
111969297
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_pro
RibLong
Big_13
Cadherin_4
BACON_2
Motif
Other DBs
NCBI-GeneID:
111969297
NCBI-ProteinID:
XP_023851099
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All DBs
Position
LG10:12164168..12189239
Genome browser
AA seq
856 aa
AA seq
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MLLLMNRYFLAPHTNYGCDIFKXISSDHLSVVFDDCTSRTSFLFHSEDSRFKVDGDGTLK
LKRGLTLHNGHKEFYVSTQSMGKKITVPVRVLHEARHGHHHHHEMTTQPQPGSSLSLPVL
NFPKSSGGLKRRKRDWVVPPINFPENDRGPFPKNMVQIRSNSDKEVKILYSITGXGADXP
PVGLFTVDKNSGFLYVTQPLDREKRDQYFLLAHAVAVGEGKAEEPMEIIVKVIDMNDNKP
VFTQNPFTGTVPEASKPGDEVLQVTATDADEEGSANSDVRYTIISQEPPLPSPNMFVINP
VTGGIRVNEHGLDREKILKYTLXIQAADXEGXGLTSVGKAIITVTDSNDNAPQFVTXSYT
VSVPENKADALVVKMPVTDGDEPHSSAWATTXKIVDGDPQGLFNVSTGPSKLEGIITTAK
PLDFEKNNKYTLLVTVXNEVPFAXXLPTSTATVXVNVEDVNEAPVFXPVEKIIRXXEDLX
XXSDLXLYTATDPDTARNQKVTYKIRNDPAGWLSINKDTGLIKVKSPMDRESTFVQDNKY
SVVVLGTDNDEIPATGTGTLIIELEDVNDNPPTIDERMIKVCNKESSPQLLSITDKDGAX
FAAPYTVQLQGSSNSNWTARMNDTKTGIILTLKTMLDSGDYTVVLRVXDXXGLHQESTIQ
ASVCDCKGADVQCXDKXVAGFGLSSILGILGAILLLLLLSLLLLMFLRKRGGEKKEPLLQ
EDDVRDNIYYYDEEGGGEDDQDFDLSVLHRGLDNRPDVFRNDIAPTMARPEYRPRPANPA
DIGNFIDDNLKAADNDPTAPPYDSLLVFDYEGGGSEAGSLSSLNSSSSGDDQDYDLLQQW
GPRFKKLSDMYGGGED
NT seq
2571 nt
NT seq
+upstream
nt +downstream
nt
atgctcctgttgatgaatcgttactttttagccccacatacgaattatggttgtgatatt
tttaaaargatatcttctgaccacctttcagtggtttttgatgactgcaccagccgcacc
agctttctctttcactccgaggattcacgcttcaaagtagatggcgacgggacgctgaaa
ctgaagagggggctgactctgcataatggacataaggagttctatgtctctacccagtcc
atgggcaagaagatcacggttccagtcagagtgctgcatgaggccagacacggccaccac
caccaccatgagatgaccacccagccccagcctggatcaagtctgtctctacctgttctg
aacttccccaagtcttcaggaggtctgaaaagaaggaagagggactgggtcgttcctccc
atcaacttcccagagaatgacagaggccccttccccaaaaatatggtgcagatcaggtcc
aacagtgataaagaggtgaagatcctgtayagcatcactggtyctggggcagaccwacct
cctgtgggactcttcactgtggacaaaaactctgggtttctctatgtgacccagcctttg
gacagggagaaaagagaccaatattttctcctagcccatgctgttgcagtgggtgaaggt
aaggctgaggaacccatggagatcattgtgaaggtcattgacatgaatgacaacaaacct
gtatttacccaaaatccatttacgggaacagtccctgaggcatcaaaaccaggtgatgag
gtattgcaggtaacagccactgatgctgatgaggagggctctgccaattctgatgtcaga
tacaccattatcagtcaggagcctccactaccaagccccaacatgtttgtcatcaaccct
gtgaccggagggattcgggttaacgaacatgggttggacagagagaaaattctwaaatat
actttggmaatccaagctgccgatwtggagggaawtggccttaccagcgttggcaaagcc
atcattacagtaackgacagcaatgacaaygcsccacagtttgtgacgycttcgtacact
gtgtcagtcccagagaataaagcggatgccttggtggtgaaaatgccagtgactgatggg
gatgagcctcactcctctgcctgggccaccacctwcaagatagttgacggggaccctcaa
ggccttttcaatgtgagcacaggccctagcaagctggagggcatcattacaacagctaag
ccycttgactttgagaagaacaacaagtacactctgctggtcactgtgswgaatgaagtc
ccatttgcmrtcmscctgcccacytccactgctactgttrtagtsaatgtggaggatgtg
aatgaagctccagtcttcascccagtrgagaagattatcaggamayctgaggacctcmct
rtkgrmagtgacctgkttctgtayacagccacagacccagacactgcaaggaatcagaaa
gtcacatacaagatacgcaatgatcctgctggatggctcagtatcaacaaagacactggg
ctgatcaaagtcaagtcccccatggacagagaatccacttttgtccaagacaacaaatac
tctgttgttgttctgggcactgacaacgatgaaatcccagcaactggcactggcaccctt
atcatagagctggaggatgtgaatgacaaccctccaaccatcgacgagaggatgattaag
gtctgcaacaaggagtcctccccacagctgctgtcaatcactgataaagacggagcggrc
ttcgctgctccatacactgtacagcttcaggggtcgtccaattctaactggactgccaga
atgaatgacacaaaaactggcattatcctgacactgaagactatgttggacagtggagat
tacacggttgtcctgagagtgtytgacaycamgggcctgcaccaggagagcaccatccag
gcctccgtgtgtgactgcaaaggagctgatgtccagtgcrccgataaarctgtagcaggc
ttcggcctctcgagcattctgggaattctaggagccattttactactcctattgttgtct
cttctgctgctcatgttcctgaggaagagaggtggtgaraagaaggagcctctgctgcag
gaggacgatgtcagggacaacatctactactatgacgaggagggaggtggcgaggatgac
caggatttcgacttgagtgttctgcacagaggtctggataaccgycctgatgttttccgt
aatgacatcgctccaaccatggcccggccagagtatcgcccacgacccgccaacccagcy
gacataggcaacttcattgatgataacctgaaggcagctgacaacgaccccactgctcct
ccctacgactccctcctggtgtttgactatgaaggaggtggctctgaggccggctccctc
agctccctcaactcctccagctcaggagaygaccaggactacgatctccttcaacagtgg
ggcccgcgcttcaagaagctgtctgacatgtacggcggaggagaggattga
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