Salvelinus sp. IW2-2015 (Arctic char): 111969343
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Entry
111969343 CDS
T05762
Name
(RefSeq) RNA polymerase-associated protein CTR9 homolog
KO
K15176
RNA polymerase-associated protein CTR9
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
salp03021
]
111969343
Transcription machinery [BR:
salp03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
111969343
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_19
TPR_14
TPR_16
TPR_CcmH_CycH
TPR_8
TPR_12
TPR_17
TPR_10
TPR_11
TPR_7
TPR_6
ARM_TT21_5th
TPR_Slam
ARM_TT21_4th
ANAPC3
TPR_EMC2
Motif
Other DBs
NCBI-GeneID:
111969343
NCBI-ProteinID:
XP_023851174
LinkDB
All DBs
Position
LG10:14720597..14731040
Genome browser
AA seq
1149 aa
AA seq
DB search
MSRGSIEIPLRDTDEVIELDFDQLPEGDEVISILKQEHTQLHIWIALALEYYKQTKTEDF
VKLLEAARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDAKKELITQATLLYTMA
DKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSTNNIPALLGKACISFNKKDYR
GALAYYKKALRTNPGCPAEVRLGMGHCFVKLSKLEKARLAFGRALELNSKCVGALVGLAV
LELNSKEPDSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYSKVQHLALHAFHNTE
VEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASSTFVLPFFGLGQMYVYRRDKENA
AQCFEKVLKAYPNNYETMKILGSLYATSDDQEKRDIAKGHLKKVTEQYPDDVEAWIELAQ
ILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNLGALHFRLGNLGEAKKYFLASLER
AKAEGEHDEHYYNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAM
ARDKGNFYEASDWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQND
TYSMLALGNVWLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDSKNLYAANGIGAVLAHK
GYYREARDVFAQVREATADISDVWLNLAHIYVEQKQYISAVQMYENCLKKFYKHQNTEVL
LYLARALFKCGKLQECKQTLLKARHVAPSDTVLMFNVALVLQRLATLVLKDEKSNLKAVL
SAVKELELAHRYFSYLAKAGDKMRFDLVLASTEARQCSDLLSQAQYHVARARKQDEEEKE
IRAKQDQERDFLRQQMHKEQEEKRTKQEEDQKKLLEQRAMYVEKTKGLLSFADGMKEERK
EKKKGGGRRKKGDFDEFVNDGSDEDLPVRRRKKRKGGSGSEEEGRKKRRRPNKGGDDGSD
DEEGGSRPKKQRKPRAGGKKILKAEPVPPSLKGKIKSKAIISSSDSSSDEDGLKIAEDRN
PRDSGSGSDNEGGHKKRIASDSESDAGRNRSGSEAGSPQRSGNSGSDSGSDRPVKRKRVQ
QQSDSEQSDNESKRSRSGSENESRPGSPAAASGSEAGSPAGSPRRSDNGSEPGGSANEAS
NHGSGSDSD
NT seq
3450 nt
NT seq
+upstream
nt +downstream
nt
atgtctcggggatcaattgaaatccccttacgggacaccgacgaggttattgagcttgat
ttcgaccagctgccagaaggagatgaggtcatcagtatcctgaaacaggagcatacacag
ttgcacatatggattgctcttgctctggagtattacaaacagacgaagacggaggacttt
gtcaagctgctggaggcggcccgtatcgatgggaacctggactacagagaccatgagaag
gaccagatgacctgtctggacaccttggcagcctactatgtccagcaggcacgtaaagag
aagaacaaagatgccaagaaggagctcatcactcaggccaccctgctctacaccatggca
gacaagatcatcatgtacgaccagaaccacttgttgggaagagcctgtttctgcctgctg
gagggggacaaaatggaccaggctgacgctcagttccactttgtcttgaaccagtccacc
aataacatccctgctctacttggtaaagcttgcatctccttcaataagaaggattacagg
ggagcactggcctactacaagaaggctctacgcacaaaccctggatgtcctgccgaggtg
aggctggggatgggccactgctttgtcaagctcagtaagctggagaaggcccgtctggcc
tttggccgggccctggagctcaactcgaagtgtgtgggagcccttgtgggcttggctgtg
ctggagctcaacagcaaggagcccgactccatcaagaatggagtgcagcttctctccaga
gcctacaccattgaccccagcaaccccatggtgctcaatcacctggctaaccacttcttc
ttcaaaaaggactacagtaaagtgcagcacctggctctccatgcctttcacaacacagag
gtggaagcgatgcaggctgagagctgctaccagttggcccgctcctttcatgtacaggag
gactatgaccaggccttccagtactactaccaggccacccaatttgcctcgtctaccttt
gtgctgcctttctttggcctggggcagatgtacgtgtaccgtagagacaaggagaatgca
gcccagtgttttgagaaggtcctaaaggcctaccccaacaactatgaaaccatgaagatc
ctgggctctctttatgctacttcagatgatcaggaaaagagagacattgcaaaaggtcat
ctgaaaaaggtaaccgagcagtaccctgatgacgtggaggcctggatcgagctggcccag
atcctggagcagaccgacatccagggcgccctctctgcctacggcacggccacccgcatt
ctgcaggagaaggtccaggctgacgtcccccctgagatccttaacaacctgggggctctc
cacttcagactggggaacctgggagaggccaagaaatacttcctggcttctttggagcgg
gccaaagctgagggcgagcatgacgagcattactacaacgccatctctgtcaccacctct
tacaacctagccaggctctacgaggccatgtgcgaattccacgaggcggagaaactctac
aagaacatcctgagggaacatcccaactacgtcgactgttacctgcgtcttggagcaatg
gctcgtgacaaaggaaacttctatgaagcttccgactggttcaaagaggctctgcagatt
aatcaggatcacccagacgcctggtccctgatcgggaatctccacttggccaagcaggag
tggggtccgggtcagaagaagtttgagcgtatcctcaagcagccgtccactcagaacgac
acctactccatgctggccctgggcaacgtgtggctccagaccctgcaccagcccaccagg
gaccgggagaaggaaaagagacatcaggatcgagccctggccatttacaaacaggtccta
cgaaacgactccaagaacctttacgctgccaacggcataggtgccgtcctggcccataag
ggctactaccgagaggcccgtgacgtgtttgcccaggtgagagaggccacagctgatatc
agcgacgtctggctcaacctggcccacatctacgtggagcagaaacagtacatcagcgct
gtgcagatgtacgagaactgtctgaagaaattctacaagcatcagaacactgaggtgctg
ctgtacctggctcgggcactcttcaaatgcgggaaactccaggagtgcaaacagactctg
ctgaaggcgcgtcacgtggcccccagtgacacggtgctgatgttcaacgtggccctggtg
ctgcagaggctggccactctggtgctgaaggacgagaagagtaacctaaaggctgtactc
agtgctgtcaaagagctggagctggcccaccggtatttcagctaccttgccaaggcaggt
gacaagatgaggttcgacctagtgcttgcctctactgaggccaggcaatgctctgacctg
ctgagtcaggcccagtaccacgtggctcgggccaggaagcaggacgaggaggagaaggag
atccgggccaagcaggatcaggagagggacttcctgcgccaacagatgcataaagaacag
gaggagaagagaaccaagcaggaagaggatcagaagaagctgctggagcagagagccatg
tacgtggagaagaccaagggtctgctctccttcgccgatggaatgaaggaggaaaggaaa
gagaagaagaaaggtggcggccgacgcaagaaaggggactttgatgagtttgtcaacgat
ggctctgatgaggacctgccagtgagaaggaggaagaagaggaagggtggcagcgggagt
gaggaggagggccgcaagaagaggaggagacccaacaaagggggtgacgatggcagtgat
gatgaggaaggaggctcycggcccaaaaagcaacgcaaacccagagcgggcggcaagaag
atcctaaaggccgagcctgtgccaccatctctcaaaggcaagatcaagtcgaaggccatc
atctcatcctccgactcttcatcagacgaggatggactgaaaattgctgaagacagaaac
cccagagacagtggttcaggctctgataacgagggcggccacaagaagcgcatcgcctcc
gacagtgagtccgacgcgggccggaaccgctctggcagcgaagctggaagcccccaacgc
tccggaaactcgggtagtgactcaggcagcgaccgtccagtgaagaggaagagagtgcag
cagcagtctgactcagagcagtctgataacgagagcaagaggagccgctctgggtcggag
aacgagtcccgaccaggctcaccggccgcagcctctggctctgaagcaggttctccggcg
ggctccccacgccgctccgacaacggatcagaaccagggggctctgccaacgaggcctcc
aaccacggctctggctctgacagtgactga
DBGET
integrated database retrieval system
