Salvelinus sp. IW2-2015 (Arctic char): 111969375
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Entry
111969375 CDS
T05762
Name
(RefSeq) ataxin-1-like
KO
K23616
ataxin 1/1L
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
111969375
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Gene cluster
GFIT
Motif
Pfam:
AXH
ATXN-1_C
RecD_N
Motif
Other DBs
NCBI-GeneID:
111969375
NCBI-ProteinID:
XP_023851229
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Position
LG10:complement(16217475..16225521)
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AA seq
811 aa
AA seq
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MKPGHERNQECLPPKKRDLNNSTSSSSSAGGGAGSGVGGGGGGGGGGGEEVPSTQSSGVG
GDTQGGGTAEEWLHAQPGLHYGVESAEGLQGLPVDQYSMLYRVALPSVSYSQTSLHPVLS
HISPAYTVPSSLLQHHPGISYPPLGYAQIPHSSFQFVSPYGAVPYAVPPGFVPSTLISPS
VALSQPHLVPYQSVIQEGLVSPPTQAHVSAHAFAKVGSSGGVPLMLTSEQAAQHQHQQHL
GPLPAAELSPRGVPVFYHPQGTRAAPAPRDPYSREQETDRDREVNGGEREQAAREMLQDS
VYNARNARLLQAASASAALEHAQDRSLKSRRLDERASPGQRSTPDTDLEVQQVVGRLASP
VQGVSGGRKEVSFGPLNLSQGSQRGREAHGEAGESAGRTAYAIHPAVYGDPRVTAHQQQA
GQPGHAVILANGQTVLVPLDYHQHQQPPQHYPSQTSDDTSAVTMASPTTYSKASESPARV
CLPDRAVVELAAVEQQPISVPFAAALTQALAPAPTPAPSNPSHFMKGAIIQLATGELKRV
EDLQTQDFVRSAEVSGGLKIDSSMVVDIRTSQQRPGLVALHFTVGEQQSKVTIDVPPEHP
FFVFGQGWSSCXPERTVQLYGLACHHLQVGDVCVSITLQQPPQQQKQPLQQQQQQQQTQA
RTSTKVNSTSGAIGQPMGPPAPQQPRPQPHFRMERVHRERERGDKEEPMQLGGVGQSEMP
TRPNRTSAEHTRSQSSYYLHTEGSARPGAGVGVVSTVSSASQRRWSAPGLQRYMKVEEGA
HPQLGPSGSSRPSFIPQEVKLSIEGRSNAGK
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atgaagccgggtcacgagcgcaatcaggagtgcctgcctcccaagaagagggatctcaac
aacagcaccagtagtagtagtagtgcgggaggaggggcaggcagtggagtgggagggggt
ggtggtggtggtgggggagggggggaggaagtgccctccactcagagctcaggggtcggt
ggtgacactcagggaggtggcacagcagaggagtggctgcatgctcagcctggtctacac
tatggagtagagagtgctgagggcctccaagggctgcctgttgaccagtacagcatgctc
tatagggtggctctcccctctgtctcctactcccagaccagtctacacccagtgttaagc
catatctctccagcttacactgtcccctcatctctcctacagcatcatccaggtatctcc
tatccccctctaggctatgcccagatcccccactcctctttccagtttgtctctccatac
ggtgcagtcccttatgcagttccccctggctttgttcccagcaccctgatctccccctca
gttgccctctcccagccccacctggtcccctaccagtcagtcatacaggaggggttggtc
tcccctcctacccaggcccatgtatctgcccatgcctttgccaaagtggggtcgtccgga
ggggtcccgctgatgctgacctcggaacaggctgcccagcaccagcaccagcagcacctg
ggcccgctgcccgccgcagagctcagtcctcggggagtgcctgtcttttaccaccctcag
ggcaccagggctgcgcctgcccccagggacccctacagcagggagcaggagacagacagg
gatagggaggtgaatgggggggagagggagcaggcagccagggagatgctccaggactca
gtctacaatgccaggaatgcaaggctgctgcaggcagcatctgcctctgcagcactggag
cacgcacaggacagaagcttgaagagccgcaggctggacgagagggcttcgcctgggcag
cgcagcaccccagacactgacctggaggttcagcaggtcgttggtcgcctagcctctcct
gtccaaggtgtgagtggagggcgcaaagaggtgtcctttggtcccctgaacctatcccag
ggctcccagagaggcagagaggctcatggggaggcaggggagagtgctggccggacagca
tacgcgatccaccctgcggtgtatggagaccccagggtgacggcccatcaacagcaggca
gggcagccaggccacgcggtcatcttggccaatggacagacagtcctggtccccttagac
tatcaccaacatcaacagccaccccagcactaccccagccagaccagtgacgacacctct
gctgtcaccatggcctcccccaccacctactctaaagcctctgagtctccagccagagtg
tgcctcccagacagggctgtggtggaactggccgccgtggagcagcagcctatttctgtc
ccattcgcggcagccctcacgcaggcccttgccccggcgcccacccctgccccctccaat
ccctcccatttcatgaagggggccatcatccagctggccacgggggagctgaagcgcgtg
gaggacctgcagactcaggattttgtgcggagtgctgaggtgagcggggggctgaagatc
gactccagcatggtggtggacatcaggaccagccagcagagacccggcctggtggcgctg
cacttcacagtgggcgagcagcagagcaaggtgactattgacgtgccaccggaacacccc
ttctttgtgtttggccagggctggtcctcctgcascccagagcgcacggtccagctctat
ggcctggcctgccaccacctgcaggtaggagacgtgtgtgtgtccatcactctgcagcag
ccgccccagcaacagaaacagcccctgcagcaacaacagcagcagcagcagacccaagcc
aggacttccaccaaagtcaactccacatcaggggccatcggccagcccatggggccccct
gccccccagcagcccaggccacagcctcacttcaggatggaacgtgtccacagagagagg
gagaggggggataaagaggagcccatgcaactagggggtgttgggcagagtgagatgccc
accagaccaaataggacttcagcagagcacactaggagccagagcagttactatttgcac
acagagggttctgctcgtccaggggcgggggtgggagtggtgtcgacagtgtcgagcgcg
tctcagaggcgctggtccgcccccggccttcagagatacatgaaggtagaggaaggggcg
caccctcagctgggcccctccggctcctctcgaccctccttcatcccacaggaggtcaaa
ctgtccatcgaggggcgctctaatgctgggaagtag
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