Salvelinus sp. IW2-2015 (Arctic char): 111969515
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Entry
111969515 CDS
T05762
Name
(RefSeq) leucine-rich repeat-containing protein 49
KO
K16606
leucine-rich repeat-containing protein 49
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
salp03037
]
111969515
04812 Cytoskeleton proteins [BR:
salp04812
]
111969515
Cilium and associated proteins [BR:
salp03037
]
Primary cilia and associated proteins
Tubulin polyglutamylase and associated proteins
111969515
Cytoskeleton proteins [BR:
salp04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Tubulin modification proteins
Tubulin polyglutamylase complex components
111969515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_9
LRR_4
LRR_8
LRR_14
LRR_NXF1-5
LRR_LRWD1
LRR_R13L1-DRL21
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
111969515
NCBI-ProteinID:
XP_023851464
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All DBs
Position
LG10:20974459..21064988
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AA seq
842 aa
AA seq
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MRPQRQQTNNNTAITGRCLSPTVNSYKLHFTAVNSQIPERNVQRPLDVRWSKDFTKEINM
DTMKMIPPRQDSRPNAHSGRGRPCAPVLAFVNEFMGPERPLLPPAAALPSGLTGDLGPQP
HRVKPRRATHSAGAIYSHSTSPLTLPTGPGDAITLSENSPSGFPIDFRSRDDCALSPERI
DLDRRGLEECPLLEGMGRLRLLNFQHNLITHIHNLSHLRHLAFLDLYDNHISQMSGISAL
ASLRVLMLGKNRIQRICSLDNLTKLDVLDLHGNQISQIGNLSHLSELRVLNLAGNCISRV
DNLQGLDSLTEINLRRNCISTVTEVDQLPCLQRLFLSCNSITSFDELACLRESCSLSELT
LDGNPVALETWYKQAALRCVLQLRQLDMKRVTEEERRMACVTARKEDEKKRESHKQAMHK
SPAHVAPQQFYTQLGLKSQDSSVTSKEKRRLAIRNAALQWEGVRACLELPAQNGAKEEIS
PEASPAHSPAQTNGLALEPSPDEQLRRVSPLSAPDRPTGGSETRIRSTSRPNSPRDPKLL
EAGGANLQSLSLSDSHLAELDGETLRLFGLGALEALERGWGVQTAGAVTVIAFRYIHFDA
IVPTLPRIRVKFPNLSHLIFLETNISRLPQLAAXAQVRRLDQLTIHPVGNPVVSLSLWRS
FLIYRLHHFNLHKINNLEVTMNDMISAERLFGTLGHIAATETPRCRLLVLLEESRKRQLQ
FLLEGRGRRAGLSPEDLRDNGKLLGEGLSRALFNYPSRDCCSVGAESPEEGAMESSSERG
AMMEQYIQAQVQRASDTNLKRDSLHKLWPSMFMEMVRDCVLEMRDRPAFRQACLNRLSTQ
GK
NT seq
2529 nt
NT seq
+upstream
nt +downstream
nt
atgcggccacaaagacaacagaccaacaacaatacagccattacaggaaggtgtctttct
cccacggtcaacagctataaactgcactttacagcagtgaactctcaaataccagagaga
aatgttcagagaccactggacgtccgatggtctaaagactttacaaaagagataaacatg
gacaccatgaaaatgattccaccaagacaagacagcaggcctaatgcacacagtggccgt
ggcaggccctgtgcccctgtgctggcgtttgtcaatgagtttatgggccctgagcgtccc
ctcctaccrcctgctgctgctctacccagtgggctgactggggacctggggccacagcca
cacagagtgaagcctaggagagcaacccacagtgcaggggccatctactcccacagtacc
tcacccctcaccctgccaactggaccaggtgatgccataacattgagtgagaattctccc
tctggttttccaattgactttcgttcccgtgatgactgtgctttgagtcctgagcgaata
gatttggacaggcgtggtctggaggagtgtcccctgctggagggcatgggtaggctgcgg
ctgcttaactttcagcacaacctcatcacgcacatccacaatctgtctcatctgcggcac
ctggccttcctagacctgtatgacaaccacatctcccagatgtctggcatctcagccctg
gcctctctcagagtgcttatgctgggcaagaacagaatccagaggatatgcagtctggat
aacctgactaaactagatgttctggacttgcatggcaatcagatctcccagatagggaac
ctctcccacctgtctgagctgcgcgtgttgaacttggcagggaactgcatctccagggtg
gacaacctgcagggcctggactcactgaccgagatcaacctgagacgcaactgcatctcc
actgtgacagaggtggaccagctgccctgccttcagcgcctctttctcagctgcaacagc
attaccagttttgatgagctagcctgcctgagagagtcttgctccctttctgagctcacc
ctggatgggaacccagtagccctggagacatggtacaagcaggccgccctgcgctgtgtg
cttcaactcagacagctggacatgaaacgtgtcacggaggaggagagacgtatggcctgc
gtcacggcccggaaggaggatgagaagaagagggagagtcacaagcaggccatgcacaag
agtcctgctcatgttgcgcctcagcagttctacactcaacttggactcaagtctcaggac
tcctcagtgacaagcaaggagaagcggcgtttggccatccgtaatgcagcactgcagtgg
gagggggtcagggcctgcctggagctcccggctcagaacggagccaaggaggaaatcagc
cctgaggcaagccccgcccacagtcccgcccagaccaatggccttgcactggaaccttct
ccggatgagcagctcagacgggtgagtccgctgtcggctccggacaggccaacagggggc
agtgagacccggatacgctccaccagtcgccccaacagtcctcgagaccccaagctcctg
gaggcagggggtgccaacctgcagagcctctccctgtcagacagccacctggcggagctg
gatggggaaaccctgcgcctgtttggcctcggggccctggaggccctggagagaggctgg
ggggtccagactgcaggggccgtcactgtcatagccttccgctacatccactttgatgcg
atcgtgccaacactgccacgcataagggtcaagttccctaacttatctcacctgattttc
ctggaaaccaacatcagccgtcttccccagctggctgctrtggcccaggtgagacgtctg
gaccagctgaccatccacccagtggggaaccctgtagtcagcctttccctgtggagatcc
ttcctcatctatcgcctgcaccacttcaacctgcacaagatcaacaacctggaggtgacc
atgaatgacatgatctctgcagagcgtctgtttgggacgctgggtcatatcgctgccacc
gagacaccacgctgccgcctgctagtactgctggaggagtccaggaagcgtcagctgcag
tttctgttggaggggcgtgggcgccgtgcaggcttgagcccagaggatctgcgtgacaac
ggcaagctgctgggagagggcctgagcagagccctgttcaactaccccagtagagactgc
tgcagtgtgggagcggagagcccagaggagggtgctatggagtcgtcatcggagcgcgga
gccatgatggagcagtacatacaggctcaggtccagagggcatctgacaccaacctgaag
agggattccctccacaagctgtggccctccatgttcatggagatggtgagagactgtgtg
ctggagatgagggaccgaccggccttccgtcaggcctgcctcaacaggctctccacacag
ggaaagtga
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