Salvelinus sp. IW2-2015 (Arctic char): 111969838
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Entry
111969838 CDS
T05762
Name
(RefSeq) contactin-4 isoform X1
KO
K06762
contactin 4
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
salp04515
]
111969838
Cell adhesion molecules [BR:
salp04515
]
Immunoglobulin superfamily
Contactins
111969838
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
V-set
Ig_C17orf99
V-set_CD47
Sp38
C2-set_2
Ig_5
Tissue_fac
C2-set
Pur_ac_phosph_N
Motif
Other DBs
NCBI-GeneID:
111969838
NCBI-ProteinID:
XP_023851915
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All DBs
Position
LG11:complement(12427093..12605127)
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AA seq
1029 aa
AA seq
DB search
MTLLWKLLLLQSLMGCLAESSVLQSPVFTKQPGSIVFPVDSQEKNREVVFSCEAQGSPSP
LYRWKLNGTAITPKSVSHYSLSGGNLRISHLDKDQDAGTYQCLAFNSFGTIVSREASLTF
AYMENFKTHRRSSVSVREGQGVVLLCGPPSHSGDLTFSWIFNEYPSFVKQDTRRFISQET
GNLYIAKVEPSDVGNYTCVVTNTVTKTRVQGPPTPLVLRSDGIMGEYEPKIEVQFPEIVH
VAKGSTVKVECFALGNPVPSINWRRMDGIPFSRKVDVRKASGVLEIPYFQQEDAGTYECV
AENSRGRNTVKGKLSFYAPPHLIEKPQDVQKPIDDSLVWECKATGKPKPSYRWMKNGENL
ESLEERIQVANGLLSISRLTLSDIGMYQCVAGNKHGEVYSNAELKVIAVAPDFSQNQLRS
HTMVKEGGDVLMECRPKMSPWGGISWRKGSETLQESNRVSILDNGNLRIQNATKPDAGLY
TCVARNQFGVASSSGTLMVKEPTIITTPPSTLDVTVGESIVLPCQVTHDPSLELKFTWFF
NEQLIHFGNHGGYFEKVGGQHSAGDIMIRNIQLRHAGKYTCAVQTKVDSISIAADLVVRG
PPGPPTSIHVEEISDTTASLSWRPGPDNHSPVTTYTIQARTPFSLGWQAVTTVPEMVGGR
RLTATVIDLSPWVEYEFRVLASNAIGTGEPSKPSKQARTKETSPKVTPANVSGGGGSRSE
LVITWEPVPEELQNGGGFGYVVAFRPYGATGWMQAAVPSSEASKYVFKNESIQPFSPFQV
KVGVYNNEGEGPFGPVITIYSAEEEPGRAPTRIRAKSLSASEIEVSWKALPWNTSKRRVL
GYELRYWEKREKEEAASVQRTVGNQTSAIIRGVRGSNTYYVTVRAYNTAGAGLPSVTVNV
TTKKPPPSQPPAKVMWNTLNSKIILNWEQVKALENESEVTGYKVLYKHNRHSRPSVMETN
TTSVELSLPMDEEYFIQIKPFGEGGEGSSSRQITIPRIPGPNAIGSATKVSTLSALSTIA
LSFTARTSL
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atgacgttgctatggaaactgctgttgctgcagtcactcatggggtgcctagcagagagc
agtgtcctgcagagcccagtattcaccaagcagcctggcagcattgtgttccctgtggac
tcccaggagaagaacagagaggtggtgttcagctgtgaggcccagggaagcccatctcca
ctttatcggtggaaactgaatggcaccgcaatcactccaaaatcagtctcacactacagc
ctgtctggaggcaacctccgaatcagccatttggacaaagaccaggatgctggaacatat
cagtgcctcgccttcaactcttttgggaccatcgtgagccgagaggctagtctaaccttt
gcatacatggaaaacttcaagacccacagaagaagctccgtgtcagttcgcgagggacag
ggggtggttctgctgtgtggtcccccatctcactctggagatctgacgttctcctggatt
tttaacgagtacccctcgtttgtgaagcaggacacgcgtcgctttatctcccaggagact
gggaatctatacatcgctaaagtggagccctctgatgtgggcaactacacctgtgtggtg
accaacactgtcaccaagaccagggtccaaggcccgcccactcctctggtgctgcgcagt
gatggtataatgggtgaatacgagccaaagatcgaagttcagtttccagagattgtccat
gtagccaaaggatcaacagtgaaagtggagtgttttgcattaggaaaccctgtcccctcc
ataaactggaggagaatggacggaatccccttttctaggaaggtggacgtgaggaaagcc
agtggcgtcctggaaatcccctatttccagcaggaagacgcgggcacatacgagtgtgtg
gcagagaactccagggggaggaacactgtaaaaggaaaactctctttctacgcccctcca
catctgatagagaaaccccaggatgtgcagaagcccattgacgattctctggtgtgggaa
tgcaaggccactggaaagcccaagccctcctataggtggatgaagaatggagagaacctg
gaatcactggaggagcgcatacaggttgccaatgggctgttgtcaatcagccgactgacg
ctgtccgatattggaatgtatcaatgtgtggctggaaacaagcatggggaggtctactcc
aatgcagagctcaaagtcatagctgttgccccagatttctcccagaaccagctgaggagc
cacacaatggtgaaggagggaggagatgtgctgatggagtgcaggcccaaaatgtccccc
tggggtgggatctcctggaggaagggcagtgagactctacaagagagcaacagagtttcc
attctggacaacggaaacctccggatacagaatgcaaccaaaccagatgcaggtctttac
acatgtgtggcacgaaaccagtttggagtggcaagcagctccggtactctcatggtcaaa
gagccgaccattataaccacgccaccgtccaccctggacgtgactgtaggagagagcatc
gtgctgccgtgtcaggtgactcatgacccgtctctagagctcaagttcacctggttcttc
aacgagcagctgatccactttggcaaccacggcggatactttgaaaaagtgggcggtcag
cattccgctggggacatcatgattcggaacatccagctgagacatgcagggaagtacacc
tgtgcagtgcagaccaaggtggacagcatctccatcgcagcagacctggtggtcagaggt
cccccaggcccgcccaccagcatccatgtagaagaaatcagtgacaccacagcctctctc
tcctggaggcccgggcctgataatcacagtccagttacaacatacaccatccaggccagg
acaccattctccctgggctggcaggctgtgaccacagttcctgagatggtggggggccgc
cgcctgacagctacagtaatagacctgagcccctgggtggaatatgagttcagagtcctg
gcaagcaacgccattgggaccggggagccaagcaaaccatccaaacaagcaaggactaag
gaaacatctccgaaggtcacaccagctaatgtaagcggaggtggaggcagtcgctcagaa
ttagtgatcacttgggagcctgttcctgaggagctgcagaacgggggagggtttggctat
gtggtggccttcagaccgtacggtgccactggctggatgcaggccgcagtgccctcatca
gaagcctccaaatatgtcttcaagaacgagagcatccagcccttctcccccttccaagtg
aaggttggagtgtacaacaacgaaggggaaggccctttcggacccgtcatcaccatctac
tctgcagaggaagagcctggcagagcgcccaccaggatccgagccaagagtctgtctgca
tctgagattgaggtttcatggaaagccctgccttggaacaccagcaagagaagagtccta
ggctatgagttgaggtactgggagaagagagagaaggaggaggcagccagtgtgcagaga
acggtaggcaaccagacatcagccattatccgaggggtgagaggaagcaacacctactac
gtcacagtgagagcatacaacacggccggggctgggcttcctagtgttactgtcaatgtc
accaccaagaaacccccgcccagccagcccccggcgaaagtcatgtggaacacattgaat
tccaagataatcctgaactgggagcaggtcaaagccctggagaacgagtcagaggtcact
ggctacaaagtgctctacaagcataaccgacatagccgtcctagtgtcatggaaaccaac
acaacgtcggtggagctctccctgcctatggacgaggagtacttcatccagatcaaacca
tttggggagggaggagaggggagcagtagcagacagatcacaatccccagaataccaggt
cccaatgcaattggctcggcgaccaaggtctctactttatcagccctcagtacaatagca
ctgtctttcacagcgcggacatcgttatga
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