Salvelinus sp. IW2-2015 (Arctic char): 111969858
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Entry
111969858 CDS
T05762
Name
(RefSeq) class E basic helix-loop-helix protein 40
KO
K03729
class B basic helix-loop-helix protein 2
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
salp03000
]
111969858
Transcription factors [BR:
salp03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
111969858
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Motif
Pfam:
HLH
Hairy_orange
bHLH_NPAS4
YabA
DUF5365
Oscp1
Motif
Other DBs
NCBI-GeneID:
111969858
NCBI-ProteinID:
XP_023851958
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Position
LG11:14498669..14502001
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AA seq
409 aa
AA seq
DB search
MERITSAQPPPCMAKHQLLEMADMQGMDFPMYVYKPRRGLKRGEDSKESYKLPHRLIEKK
RRDRINECIAQLKDLLPEHLKLATLGHLEKAVVLELTLKHVKALSTLLDQQQQKIIALQN
GMQISDQSSVSSENSEEMFRLGFHVCAKEVLQYLANQESSKDHLTPSHMISHLQKVASEV
LQGPPRPKPEESTHKPVESMEKPAGHPPKGNEGNTKNFVSVIQRTYPHGHGEQSGSDTDT
DSGYGGEHEKRDPKGQRTSCYGKEGELKYDVAERMAGGGIKQEGDEPQIKRLRADSSEDE
SSSGQVVSSHGSYMSFSQHQTPLCMPFYLIPQMAAAWPMLEKCWYQGGMPLLYPGMSGSA
ASLSPEKLPQNLVMSPRPGSPAHHQTPMDSPALFQALKQVPPMNLESKD
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atggagaggattacaagtgcacaacctcctccttgtatggcaaaacaccagttgctggag
atggcagacatgcaaggaatggatttcccaatgtacgtgtacaaaccccgacgggggttg
aagcgcggggaagacagtaaggagtcgtacaagttaccccaccgattgattgagaagaaa
agacgtgacagaatcaatgaatgcattgcccaactgaaggatttattgccagaacatctc
aaacttgcaactttgggccatttggagaaagctgtggtgttggaactcaccctgaagcat
gtgaaagccctgagcactctcctggatcagcagcagcagaaaatcattgcattacagaat
ggcatgcaaatcagtgatcagagcagtgttagctcagagaacagcgaggagatgttccgc
cttggtttccacgtctgtgctaaggaggtcctccagtacctggctaaccaggagagcagc
aaagaccacctgaccccctcccacatgatcagccatctccagaaagtagcatcagaggtg
ctccagggtccacccaggcccaagccagaagagtctacccacaaacctgtcgagagcatg
gaaaagcctgctggtcatccgcctaagggcaacgagggtaacaccaagaactttgtgtct
gtcattcaaaggacatacccccacggacatggggagcagagtggcagtgacacagacact
gacagcggctatggaggggaacacgagaaacgggaccccaaaggccaacgcacaagctgc
tacggcaaggagggggagctcaagtatgatgtggctgagaggatggcaggaggtggcatc
aagcaggagggtgatgagccccagatcaagaggttaagagctgactcctcagaggatgag
tcttcctctggacaggtggtcagcagccacggaagctacatgagcttctcccaacaccag
accccactctgcatgcccttctacctcatcccccaaatggctgcagcatggcccatgctg
gagaagtgctggtaccaagggggcatgccccttttgtacccaggcatgagtggttctgca
gccagcttgtctccagagaaactaccccaaaacctggtaatgtcgcccaggccaggttcc
ccggcacaccaccagacacctatggattcaccagctctcttccaggctttaaagcaagtc
ccccccatgaacttggaatccaaagactga
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