Salvelinus sp. IW2-2015 (Arctic char): 111969864
Help
Entry
111969864 CDS
T05762
Symbol
traip
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase TRAIP
KO
K11985
TRAF-interacting protein [EC:
2.3.2.27
]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
salp04121
]
111969864 (traip)
Enzymes [BR:
salp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111969864 (traip)
Ubiquitin system [BR:
salp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
111969864 (traip)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-C3HC4_3
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
zf-RING_11
zf-C3HC4_4
zf-RING_Vps41
WEMBL
Gp58
MAD
zf-RING-like
Zn_ribbon_8
RING_XB3-XBAT31
Uds1
zf-RING_16
Fez1
zf_RING_Vps8
T3SSipB
KxDL
RINGv
ATG14
zf-Nse
Crescentin
SLX1_C
Baculo_PEP_C
Laminin_II
Vps52_CC
Prok-RING_1
CC4_CEP85
Motif
Other DBs
NCBI-GeneID:
111969864
NCBI-ProteinID:
XP_023851964
LinkDB
All DBs
Position
LG11:15037756..15043343
Genome browser
AA seq
455 aa
AA seq
DB search
MPIRAXCTICSDFFDHSRDVAAIHCGHTFHYECLLQWFQTAPNKTCPQCRKQVSTRHIIN
KLFFDIGGEGEGSSADPECLQNELDRMKAVLSTKERDWRDRLNMVEGLKETVDRQKKELD
SVRKETGEKEMLCSVLRKQMKYLENQQSETQAAKEEARRLRTKMKTYESLDVVLQGQRAE
VDSMISDMGVGQAAVEQLSIYCISLKKEYENLKGSLRYSNEMSEKLKREVFASNNKLQKA
TMEMNRTNDDMKAVQNDLTNADKEITSLKKKVEILQKTLSTPTRTNEALSRLVFESPAPV
ELQQPRLHQPANSEDIDLNMTFDITTPDLVDKRASQVPSKKMRLDPATLSSSPTKHRDSA
LFGSKAREEAAPMGTFFRNSILFRKKTFGSMLDPQRSKLGAVRSGYDGLGGRTKFFQPSP
LSDIRPLMMKAKRKKVSRPAPPKISTCLTLDSYLE
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgcctattcgtgcctartgtaccatctgttcagatttcttcgatcactcaagagatgtg
gctgccatccactgtgggcacaccttccactatgaatgtcttcttcagtggtttcagact
gcccccaacaagacatgtccacaatgtagaaaacaggttagcaccagacacattatcaac
aagttgttctttgacattggtggtgaaggagagggatcctctgcagatccagagtgtttg
cagaacgagcttgatagaatgaaagctgttttaagtaccaaagagagagactggagggac
agactgaatatggtagagggcttgaaggagactgtggacaggcagaagaaagaactggac
agtgttaggaaggagactggcgagaaagagatgctctgctcagttctcaggaaacagatg
aaatacctggagaaccagcagagtgagactcaggctgctaaggaggaggcccgacgactc
aggaccaaaatgaaaacatatgagagtctggatgtggtgttacagggtcagagggctgag
gtggattccatgatcagtgacatgggtgttggccaggctgccgtggagcagctctccatc
tactgcatctctctcaagaaagagtatgaaaacctaaaagggagcctccgatattcaaat
gaaatgtctgaaaagctcaaaagggaggtgtttgcttcaaacaacaagttgcagaaagcc
acaatggagatgaacaggaccaatgatgacatgaaagctgtccaaaatgacttgaccaac
gcagacaaagagatcactagtctgaagaaaaaagttgagattcttcaaaagaccctgagc
acaccaacccgcactaacgaagccttgagccgactagtcttcgagagccctgccccagtg
gagctgcaacagccccgtctccaccagcctgccaacagtgaggacattgaccttaacatg
acctttgacatcaccacacctgacctggtggataagagggcatcacaggtcccatccaaa
aagatgcgtctggatccagccacgttgtcgtcctcgccaaccaaacaccgtgacagcgcc
ttgtttggaagcaaggccagagaggaggcagcgccaatgggtacattcttccgtaattcc
attctgttcaggaagaagacctttggcagcatgctggacccccagaggagtaaactggga
gctgtcagaagtggttatgatggacttggagggagaaccaaattcttccaaccttctcct
ttgtcagatattcgcccgctcatgatgaaggcaaagagaaaaaaggtttcccgaccagct
cctcccaagatctccacctgtcttactctggacagttatctggagtga
DBGET
integrated database retrieval system
