Salvelinus sp. IW2-2015 (Arctic char): 111969876
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Entry
111969876 CDS
T05762
Name
(RefSeq) DEP domain-containing mTOR-interacting protein isoform X1
KO
K20402
DEP domain-containing mTOR-interacting protein
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04140
Autophagy - animal
salp04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
111969876
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
111969876
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
salp04131
]
111969876
Membrane trafficking [BR:
salp04131
]
Autophagy
Other autophagy associated proteins
mTORC1 complex
111969876
mTORC2 complex
111969876
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEP
PDZ_6
PDZ
PDZ_2
Motif
Other DBs
NCBI-GeneID:
111969876
NCBI-ProteinID:
XP_023851994
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All DBs
Position
LG11:complement(15309096..15313119)
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AA seq
408 aa
AA seq
DB search
MEKMGSSINRKSMARLHKAKVMIAGEQLRLRLHDGKLIKDRRYHLRTYPNCFVAQELTDW
LISNKEAPDRATAVCLMQHLMDHDIVQHVCDKHPIFKNAKLLYRFRKDDGTFPFNTEVKV
FIRGQRLYEHLITGRDSILQLREEQGVAYQRSIPGCQLMDWLLQNGETESRRQGLEFCRA
LLEHGIIQHVSKKYDFFDSRLLYQFCINFRRRRHLSELLNETERDKKEGASVHALEDNHA
DSPFVLPKIPPQEERSGFQSAVQPNKPLKMIPNVHQAILNSLQLHASGYLPPATLSSAPV
VRCNPKSVLKRNVTCEELLSPGAPFIKRVLTVMGDAVGWGFVIRGVAPVYVQAVDPGSPA
AAAXVKVRQFVCQVNGRSVLHLDYLQVTRLVMTGPRTVVLEVMEPLGS
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atggagaaaatgggaagcagcataaacagaaaatcaatggccagactgcacaaggctaaa
gttatgattgctggagaacaactgaggttgaggctgcatgatggcaaactgatcaaggat
cgacggtaccatctgcgcacttaccccaactgctttgtagcccaagagcttacagactgg
ttgatcagcaacaaggaagctcctgatcgggccacagcagtctgcctcatgcaacacctg
atggaccatgacattgtgcarcatgtttgtgacaagcaccctatattcaagaatgcaaaa
ttgctgtaccgtttccgtaaggatgatggcacatttccatttaacaccgaggtgaaggtc
ttcatccgaggacaacgattgtatgagcatctaataactggcagagactccattctgcaa
ctaagggaggagcagggtgttgcataccagcgctccatccctggctgccagttgatggac
tggttgttacagaatggagagacagagagtaggcgccagggtttggagttctgccgtgct
ttgctagagcatggcatcattcagcatgtgtcaaagaagtacgacttctttgacagtaga
ttactgtatcagttctgcatcaattttcgccgccggcgccacctgtctgagctcttgaat
gaaactgagcgagacaaaaaggaaggtgcatcagtgcatgcactggaggacaaccatgcc
gacagcccctttgtcctgcccaagatccccccacaagaggaacgcagtgggtttcaatct
gcagtgcagcccaataaaccattgaagatgatacccaatgtgcatcaggccattttgaac
tctctgcagctacatgctagtggatatttaccccctgccacactctcctctgccccagtg
gtgagatgcaatccaaaatcagtacttaagaggaatgtaacatgtgaggagctactgtcc
cctggtgcacccttcatcaagagagtgttgacggtgatgggagatgcagtgggctggggc
tttgtgatcagaggtgtggctccagtttacgtccaggcagtcgatcctggaagccctgct
gctgctgcagsggttaaggtgcgtcagtttgtgtgccaggtgaatgggcggagcgttctc
cacctggattacctccaggtcaccaggttggtgatgaccggacctcgcactgttgtgttg
gaggtcatggaaccactggggtcttga
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