Salvelinus sp. IW2-2015 (Arctic char): 111969883
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Entry
111969883 CDS
T05762
Name
(RefSeq) protein snail homolog Sna-like
KO
K05707
snail 1
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
111969883
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
salp03000
]
111969883
Transcription factors [BR:
salp03000
]
Eukaryotic type
Zinc finger
Cys2His2 Snail
111969883
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
zf-C2H2_jaz
zf-met
zf-C2H2_6
zf-Di19
zf-C2HE
zf-C2HC_2
Zn-ribbon_8
zf-BED
Zn_Tnp_IS1595
zf-Dof
zf-C2H2_11
Elf1
Motif
Other DBs
NCBI-GeneID:
111969883
NCBI-ProteinID:
XP_023852014
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Position
LG11:15497128..15499767
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AA seq
258 aa
AA seq
DB search
MPRSFLVKKYFANKKPNYSELECQNATSLERYPLAELPAGXNNSAATCYTTGLVWDVSFL
PALYVPTSPTDASPTPGPLDLSSPSSLSSSASSSGEEDEGRTSDPPSPEPTDTYHPPQRP
KRTGIKSHGALTEDERVAPVTAARPAFFCKHCPKEYTSLGALKMHIRSHTLPCVCPTCGK
AFSRPWLLRGHIRTHTGERPFSCQHCNRAFADRSNLRAHLQTHAEVKKYQCGVCSRTFSR
MSLLQKHSAVSCSTSSTA
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgttctttcttggtcaaaaagtatttcgccaataaaaaacccaactatagtgaa
ctggagtgtcaaaatgccacctcgctggagaggtacccactagctgagcttccagcaggg
gkcaataactcagctgccacctgttacacaacaggactggtatgggacgtgagcttcctt
ccagccctctacgtccccacatcccccactgatgcctctcccacccctggtcccctggac
ctcagctccccatctagcctcagcagcagtgccagtagcagtggagaggaggatgagggg
cgcacctctgacccacccagccctgagcccacagacacktaccaccccccccagcgcccc
aaacgcacaggcatcaagagccatggggccctgaccgaggacgagagagtggccccygtc
actgcagcaaggccagccttcttctgcaagcactgccctaaagagtacaccagcctgggg
gctctgaagatgcatatccgctcgcacacactaccctgtgtctgccccacctgcggaaag
gccttctccaggccctggctgctgcgcggccacattcgcacacacacaggtgagcggcca
ttctcctgccaacactgtaaccgtgccttcgccgaccgctccaacctgcgggcgcacctg
cagacccacgctgaggtgaagaagtaccagtgtggcgtgtgttctcgtaccttcagccgc
atgtccctcctccagaaacacagcgcagtcagctgctccacctcstccacagcatga
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