Salvelinus sp. IW2-2015 (Arctic char): 111969942
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Entry
111969942 CDS
T05762
Name
(RefSeq) LOW QUALITY PROTEIN: membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1-like
KO
K05631
atrophin-1 interacting protein 3 (BAI1-associated protein 1)
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
111969942
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GFIT
Motif
Pfam:
PDZ
MAGI_u5
PDZ_6
MAGI_u1
PDZ_2
WW
Guanylate_kin
DUF6288
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
111969942
NCBI-ProteinID:
XP_023852109
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All DBs
Position
LG11:18635968..18829058
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AA seq
1252 aa
AA seq
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MSKVIQKKNHWTTKVNECAVLKDARGDLNVQLLGGAENGEFAYIGQVNDGIVVYKNGKLT
EGALILEVENLSISGLPLYDVQTVINNCNGPIRLKTVRQGNKLNKDLKHYLSQRFQKSSP
DHELQQTIRDNLYRHAVPCTTRPPRHGEVPGVDYNFLPVEDFLALEQRGTLLEIGTYEGN
YYGTPKPPIQPPSGKVITSDALQDSLPGSQHSTPRRTKSYNEMQNAGIVPVDLEEDEELP
EMNSSLTGDSSEPDEHPSVRPYALRENAPSYGVINASSSTTDGSQQTHTHLSLPPTEEDP
LGPLADNWEMAYTENGEVYFIDHNTKTTSWIDPRCLNKPPKPLEECEDDEGVHTEEMDSE
LELPTGWEKIEDPVYGLYYVDHLTARPSSENPILEAKRRKQLEQQQPPEEWIEDATLAGA
PLANYTANHQETYRDTQARPPLPPLIGPKRGKPFFTRNPAELKGTFINTKLRKSHRGFGF
TVVGGDEPDEFLQIKSLVLDGPAAVDGKMETGDVIVSVNDTCVLGYTHAQVVKVFQSIQI
GSIVNLELCRGYPLPFDPDDPNTSLVTSVAIVDKEPIIINGQASYDSPSSHGSQTGGPVN
GTRESGPHSPSSAEVASNGSHSYPSDSVTLASSIATQPELITVHMEKGDKGFGFTIADSP
AGGGQRVKQIVDYPRCRGLKEGDIIVEVNKRNVQSMSHNQVVDLLSKCPKGSEVTMLVQR
GGGVAPAKKSPKLQLARKDSQNSSVHSVSSHRSTHTDSPVHPSLATPFSESAAPPPPSQP
LPGLPPQDPQADGTIQRKPDPFKIWAQSRSMYESRLPDFQEQDIFLWRKDTGYGFRILGG
NEPGEPIYIGHIVKYGAADEDGRLRSGDELICVDGTAVVGKSHQLVVQLMQQAAKQGHVN
LTVRRKTGYGGSKGEGEVPPSPASSHHSSTQAPSLTEEKRTPQGSQNSLNTVSSGSGSTS
GIGSGGGGGSGSTVVNTALQPYDVEIRRGENEGFGFVIVSSVSRPESGTTFAGNACVAMP
HKIGRIIEGSPADRCGKLKVGDRILAVNGCSITNKSHSDIVNLIKEAGNTVTLRIIPGDE
SSNASLLTNAEKIATITTTHTPQQQAAPEPRNNTKPKQESSFEFKSPQAPPPPAPTTQPP
AQDAGFYSVDLERENKGFGFSLRGGHEYNMDLYVLRLAEDGAAVRNGKMKVGDEILEING
ESTKGMKHARAIELIKNGGRRARLVLKRGDGSVPEYGGSIYENIPFSPVFTP
NT seq
3759 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaagtgatccaaaagaagaatcactggaccactaaagttaacgagtgcgcggtc
ctcaaagacgctcgcggtgacttaaatgtgcaattgctcggtggtgcggagaacggagag
ttcgcctacatcggacaagttaacgatggtatcgtggtttacaagaatggaaaattaaca
gagggggcgttgatattggaagtagagaacctctcgatctctgggttgcccctgtatgat
gtacagacagtgataaataattgcaatggtcccatcagattgaaaacggtcagacaagga
aacaagctgaataaggacctgaagcactatctgagccagcgattccagaagtcctctccg
gaccacgagctgcagcagaccatccgagacaacctctaccgccacgccgtgccttgtaca
acccgtcccccgcgtcacggagaggtgcctggggtagattacaacttcctgccggtggag
gacttcctggcgctggagcagaggggaacccttctggaaataggaacatatgaaggtaac
tattatggaacacccaagccaccgatccagccccctagtgggaaagtgattactagtgat
gctttgcaagacagcctcccgggctcccagcactccactccccgacgcaccaagtcctac
aatgagatgcaaaatgctggaatagtgcctgtagacctggaggaggacgaggaactcccg
gagatgaacagtagcttaacaggagactcaagtgaacccgacgagcacccctctgtgcgc
ccctacgccctacgtgagaacgccccgtcctacggtgtgatcaacgcgtcgtcatccacc
acggacggctctcagcagacacacacacacctcagccttcctcccacagaggaggacccc
ctgggacctctagctgacaactgggagatggcctacaccgagaacggagaggtctacttt
atagaccacaacacaaagaccacatcctggatcgacccccggtgcctgaacaaacctccc
aaacccctggaagaatgtgaagacgacgaaggggtacacacagaagagatggacagtgag
ctagagctgccaacaggctgggagaaaatagaggacccagtctatgggctttactatgtg
gatcacttaacagcaagaccaagtagtgagaaccctatactggaggctaagcggcgaaag
cagctcgagcaacagcagccaccagaagaatggatagaggatgccacccttgctggtgcc
cccctggccaactataccgccaaccaccaggagacctacagggacacccaagccagaccc
ccactgccgcccctcatcgggccaaaacgagggaagcccttcttcacacggaacccagca
gagctaaagggaaccttcatcaacaccaaactgaggaagagccaccgggggttcggcttc
accgttgtcgggggcgacgagcctgatgagttcctacagatcaagagtctggttctggac
ggacctgctgccgtcgacggcaagatggagacaggtgacgtgatcgtgagtgtcaatgac
acatgcgtactgggctacacccacgctcaggtggtgaaggtcttccagtccatccagatc
ggctccatcgtcaacctggagctttgccgcggctaccccctgccctttgacccagacgac
cccaacactagcctggtgacctccgtggccatcgtggacaaggagcctatcatcatcaac
ggccaggcgagctacgactctccgtccagccacggcagccagaccggaggccccgttaat
gggacgagagagtcaggaccccacagcccctcctctgccgaggtggcgtccaacggctcg
cacagttaccccagcgactctgtgacgctggcgtcatccatagcgacgcagccggagctg
atcacagtgcacatggagaagggagacaaaggctttgggttcaccatcgcagacagccct
gcagggggaggacagagggtcaaacagatcgtagactacccccgctgcaggggcctgaag
gagggggacattatcgtggaggtgaacaagaggaacgtccagagcatgagccacaaccag
gtggtggacctgctcagcaagtgccccaaaggaagtgaggtcaccatgctggtgcagaga
ggtggaggggtggctcctgcaaagaagagcccaaagctgcagttagcgaggaaggacagt
cagaacagttctgtgcacagtgtttccagccaccggagtacccacactgactcccctgtg
cacccgtccctggccaccccattcagcgagagcgccgcccccccacccccctcccagccc
ctgcccggcctgcctccccaggacccccaggcagacgggaccatccagaggaaaccggac
cccttcaagatctgggcccagtccaggagcatgtatgaaagtaggctgcctgatttccag
gagcaggacatcttcctgtggagaaaggacacgggctacgggttccggatcctgggaggg
aacgagccaggagagccaatctacatagggcacatagtgaagtacggggcggcggatgag
gacgggcgcctgcgttcgggggatgagctcatctgtgtggacggcacggcggtggtgggg
aagtctcaccagctggtggtacagctgatgcagcaggccgccaagcagggccacgtcaac
ctcactgtgcgacggaagaccggctacggcgggtctaaaggggagggcgaggtgcccccg
tccccagcctcgtcccaccacagcagcacacaggccccctccctgaccgaggagaagcgg
accccccagggcagccagaactccctcaacactgtcagctccggcagtggctccaccagc
ggcatcggcagcgggggcggtgggggctcgggtagcaccgtggtcaacactgccctgcag
ccctacgacgtggagatccgccgcggggagaacgagggcttcggatttgtgattgtttcc
tctgtgtcccgacccgagtctggcaccacctttgctggaaatgcatgtgtggccatgccc
cacaaaataggtcgtattattgaggggagccctgcggaccgctgtgggaagctgaaggtg
ggagaccgtatcctggccgtcaacggctgctccatcaccaacaagtcccactcggatatc
gtcaacctgatcaaggaggccgggaacacggtcacgctaaggatcattcccggagacgag
tcctctaatgcatcactgctgaccaacgctgagaagatcgccactataacaaccactcac
acgccccagcaacaggctgcacctgaacccagaaacaacaccaaaccaaaacaggagtcc
tcttttgagttcaaatccccccaggcccctcctccccccgccccaacaacacaacctcca
gcccaggatgctggcttctactcggtggacctggagagggagaacaaaggttttgggttc
agcctgagaggaggtcatgagtacaacatggacctgtatgtgctgagattagctgaggac
ggagcagctgtacgcaatggcaagatgaaggtgggagatgagatcctggagataaacggt
gagagcaccaagggcatgaagcacgcccgcgccatcgaactgattaaaaatggcggccgc
cgcgcccgcctagtcctcaaacggggcgacggctcggtgcctgaatatggtgggtcaatc
tacgaaaacattccattttcccccgtcttcaccccctga
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