Salvelinus sp. IW2-2015 (Arctic char): 111969982
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Entry
111969982 CDS
T05762
Name
(RefSeq) eukaryotic translation initiation factor 4 gamma 3 isoform X1
KO
K03260
translation initiation factor 4G
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
salp03019
]
111969982
03012 Translation factors [BR:
salp03012
]
111969982
Messenger RNA biogenesis [BR:
salp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
111969982
mRNA cycle factors
Stress granule specific factors
111969982
Translation factors [BR:
salp03012
]
Eukaryotic type
Initiation factors
eIF-4
111969982
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G
MA3
W2
PP_kinase
Motif
Other DBs
NCBI-GeneID:
111969982
NCBI-ProteinID:
XP_023852190
LinkDB
All DBs
Position
LG11:complement(21859743..21944481)
Genome browser
AA seq
1816 aa
AA seq
DB search
MSLPTKIVPKPATVAVSGPGTVPSPSSQLRATLTSVSLPPGAPGAPQSNAVPPPQIFLNM
TRPRIPRVQPTLDDRIFPTQPGVTAVYSVPRHPGPPYTAHDITKGHPNLAGTPPGHAHSP
ALSQVSVPTASPYRYPKGWEAGGGSPYTTGQNAGSTPLVYSPQTQQMNAQPQSRPSSMPS
PSPSPPVIWNHQFATGPRPTHHQGGFRPIQFFQRAQMQTARPTIPTNAPSLRPGSQNPTA
AVYPPNQPTMMMMAPMPFPSPQAAQYYIPQYRHSTPYVGPPQPFSVQPPGSGTFYPGPGP
GEYPAQYAPGPQFYPGQQVYPPSPPIIVPTPQQPPPAKREKKPSSQIRIRDPNQGGRDIT
EEIMAGGTGSRNPTPPVGRPSSTPTPPQFLWPHPHYPHIFYLKSQQQQSSGSQTPEQGQG
QAHPAYSLEPSKQQQPTPGAADSKPGPVYDKPKLEQVIRKPSSPGIGQPEPSMAWREASA
PVTAPSPPVETELPSPAPVMVAPIPAPRPVASPNPIEQPSAVEPATPTPSAAEPKTLPPT
THSQIQNTVEPLPEAPHTLAASPTLTPKALNGHADTGAELDTQAQEPSPLDSSPSPPQPQ
ASTPASREDCSEAVPSEVRAEIPPAVTDSIAPIAVVPVTLTSKPAPAFPAPPPGLPPLVQ
ATAEASKPADTKDVPLKAGTEAFITPDNKPEPQLQALSRKSPTTGCQTAPDAPKTWKKPN
EESPVGDAQQRETEEELKPLEEAAGDQALPPARSCSTSPPPSTAPSALEAEERPPAPEEN
GEAEPMRNGAGHTSETESSDSGATPGDNEGSTGAPPDLFHEDLETNGKRQYKRDFLLGFQ
FMAACTQKPDGLPQISDVVLDKINQNKLPTRAVESRVISRGPDFTPAFADFGRQMSGGRG
GAAVSHTHSQAHQMMNMGSGARRPPPRKIILNVSANEEVQLKKAENAWKPGMKRAGPSDD
PEVITTQELFRKVRSILNKLTPQMFNQLMKQVTDLTIDTEERLKGVIDLVFEKAIDEPGF
SVAYGNMCRCLTTLKVPMTDKPGTTVNFRKLLLNRCQKEFERDKVDDVVFERKQKELDSA
QSSDQERLRLELEEAKDKARRRSIGNIKFIGELFKLKMLTEAIMHDCVVKLLKNHDEESL
ECLCRLLTTIGKDLDFEKAKPRMDQYFNQMEKIVKERKTSSRIRFMLQDVIDLRLHNWVS
RRADQGPKTIEQIHKEAKIEEQEEQRKVHQQLLSKDTKRRPEQQQQQREQQREQQREQRV
QQRDETWNTVPMTKNSRTIDPTKIPKISKPQMDEKIQLGPRASLNWMKGSSGGAKASDSE
LSRSGGGGASLNRYSALQSTQSHQTTPLAQNLEYDTRRTLGSRSSAGRERSEKPLSPAPS
RPGSFVRGGSAKELPESPALSPEEPRRELESPRRPSVSEDKTEPERSSAREPVKAEPVVA
QSPDRPALSEEEMERKSRAIIDEFLHINDYKEAVQCVDELDMSSQLHVFVRVGVESTLER
SQITRDHMGKLLFQLVQQDILAKPQFFKGFADTLELADDMAIDIPHIWLYLAELLSPVLR
DRGFSMRELFSELSKPLLPVGRAGILFSEILHILCKQMSHRKVGTLWRESGLSWSDFLPE
GEDVQDFISEQKLQFTEADCSSHEAALATTALSLVVLNQQLERLLLEDMASDEQIFDWVE
ANLDESQMSSSPFLRALMTAVCKAAVKDESASCRVDVAIIQRRLPVLLKYLNSDTERQLQ
ALYALQALIVTLDQPPNLLRMFFDCLYDEDVISEDAFYKWETSKDPAEELGKGVALKSVT
AFFTWLREAEEESEDN
NT seq
5451 nt
NT seq
+upstream
nt +downstream
nt
atgagtttgccgacgaaaatagtcccaaaacccgccactgtcgcagtaagtggacctgga
actgtcccgtctccgtcgagccaactgcgggctaccctgacctccgtgtctttaccaccg
ggagccccaggtgctcctcagtcgaacgccgtgccgccacctcaaattttccttaatatg
acgcgtcccaggatccctcgggttcagccaaccctggacgaccgcatcttccccacacag
cccggcgtcactgccgtctacagcgtaccgaggcaccctggtcctccctacacggctcat
gatatcacaaagggacaccctaacttggcgggcacgccgccaggacatgcccactcaccg
gcgctctctcaggtatcagtacccacagcttccccatatcgctaccctaagggctgggag
gcaggcggcgggtctccatacaccactggacagaatgctggctccacacctctagtgtat
tctcctcagacccagcaaatgaatgcacagccacagagtcgcccgtcatccatgcccagc
cccagccccagcccccctgtcatatggaaccaccagtttgcgacaggccctcgaccaacc
caccatcagggaggattcaggcccatccagtttttccagagggctcagatgcagacagcg
cggccaaccatccccaccaacgctccatctctgcggcccggctctcagaaccccacagcg
gcggtatacccccccaaccagcccaccatgatgatgatggcccccatgcccttcccctcc
ccacaggctgcccagtactacatcccacagtatcgccacagtacgccctatgtggggccg
ccccagccgttttcagtgcagccgcctgggtctggcacattctatcctggccctgggccg
ggggagtaccctgctcagtatgctcccggacctcaattctatccaggacagcaggtgtac
cccccctcaccccccatcatagtgcctacaccgcagcaacctccaccagccaagcgtgag
aaaaaaccatcctcccagatccgtatccgtgaccccaatcagggaggcagggacatcaca
gaggagatcatggcagggggcacagggagccggaatccaactccccctgtcggacgaccc
tcctccacccccacccctccgcagtttttatggccgcaccctcattatcctcacattttc
tacctcaaatcgcagcagcagcagtcgagcggcagccagactccggagcagggccaaggc
caggcccacccagcctacagcctygagccctccaagcagcagcagcccacgcctggggct
gcagacagcaaaccagggccagtatatgataagccaaaattggagcaggttatccggaag
ccttcctctcccgggattggacaaccagaaccttctatggcgtggcgagaggccagtgca
cctgtaactgccccatctccccctgtagaaacagagcttccctctcctgccccagtgatg
gtggcgcccatccctgcccctcgtcctgttgccagccccaaccccattgagcagccctct
gcagtggagcctgctactcccactccctctgcagctgagcccaagaccctgcctcccacg
actcattcccagatccaaaatacagtggagcctcttccagaagccccacacaccctggct
gcttcccccaccctaaccccaaaagctttgaatggccatgctgacactggggctgagctg
gacacccaggcccaggagccctcccccctagattcctctccctccccaccccagccccag
gcttcaaccccggcctccagagaagactgtagtgaggctgtgcccagtgaggtgagagca
gagatcccccctgctgtcacggactctatcgcacccatcgctgtagtgccagtcactctg
acctccaaacctgcgcctgcttttccagcacctccccctggccttccaccactagtgcag
gccacagcggaggccagcaagcctgccgacactaaagacgtccctctcaaagcagggaca
gaggcattcataacaccagacaacaagcctgaaccacagctacaagccctttccagaaag
agtcccactacaggatgtcagactgctcctgatgcaccaaagacctggaagaaaccaaat
gaagagagtcctgttggagatgcccaacagagggagactgaggaggagctcaagcctttg
gaagaggctgctggagaccaggccctgccacccgccaggagctgcagcacctctccccct
ccctcaacagcgccctcagccctggaggcagaggagaggcccccagcccctgaggaaaac
ggggaggctgagcccatgaggaacggagcaggacacacctcggagacggagagcagtgac
agcggggccacccctggggacaatgagggctccactggagcacccccagacctcttccat
gaagatctggagactaatgggaagcgtcagtacaaacgggacttcctgctgggctttcag
ttcatggctgcctgtacacagaagccagatgggctgcctcagatcagtgacgttgtgctg
gacaagataaaccaaaacaagctgccaacccgggcggtagaatccagggtgatctcccga
ggccctgacttcacaccggcctttgctgactttggcagacagatgagtggaggacgcggc
ggagctgcagtgagtcacactcactcccaggcrcaccagatgatgaacatggggagtggt
gcccggcggcccccgcccaggaagattatcctgaacgtgtcggcgaatgaagaggtgcaa
ctgaagaaggctgagaatgcctggaaacccggcatgaagagggcggggccatcagatgac
cctgaggtcattacaacacaggagctcttccggaaggtgcgcagtatcctcaacaaactg
acgcctcagatgttcaaccagctgatgaagcaggtgacggacctcaccatcgacacggag
gagcgcctcaaaggcgtcatcgacctggtctttgagaaggccatcgacgagcccggcttc
tctgtggcctacgggaacatgtgtcgctgcctcaccacgctcaaagtgcccatgacggac
aaacccggaaccacagtgaacttccgcaaactgctgctcaaccgttgtcagaaggagttt
gagcgggacaaggtggatgacgtggtgtttgaaaggaaacagaaggaacttgactctgca
cagtccagtgatcaagagagactacggttagagctggaggaggccaaggacaaggcccgc
cggcgctccatagggaacatcaagttcatcggggagctgttcaagctcaagatgctgaca
gaggccatcatgcacgactgcgtggtcaagctgctgaagaaccatgacgaggaatcgctg
gagtgcctttgcaggctgctcaccaccatcggcaaggacctggactttgagaaggccaag
cctcgcatggatcagtatttcaatcagatggagaaaattgttaaggagcggaagacatca
tctcggatacggtttatgctgcaggacgtgatagacctccgattgcacaactgggtgtcc
aggagagctgaccagggccccaagaccatcgagcagatccacaaagaggccaagatcgag
gagcaggaggagcagaggaaggtgcaccagcagctgctttccaaggacaccaagagaagg
ccagagcaacaacagcagcagagagaacagcaaagggagcagcagagggagcagcgtgtg
caacagagagacgagacatggaacactgtgcctatgaccaagaacagcaggacaatcgac
cccaccaagatccccaagatctccaagcctcagatggatgagaagatccaactaggacca
cgagcctcactcaactggatgaagggcagcagcggaggggccaaggccagtgactccgaa
ttatcccggtctggtggtggtggtgccagtttaaaccggtactctgcactccagtccacc
caatctcatcaaaccaccccactggcacagaacctagagtatgacactagaagaaccttg
ggcagtcgaagcagtgcagggagagagcgaagtgagaagcccctgagcccagctccgtcg
aggcccggttccttcgtccgaggcgggagtgccaaggagcttccggagagcccggccctg
agtcctgaggagccccgcagagagctggagagccccaggaggcccagcgtaagcgaggac
aagactgagccagagcgcagcagtgccagggagcctgtgaaagcagagcctgtggtggcc
cagtctccagacagacctgccctctctgaggaggagatggagaggaagtccagagctatc
attgacgagttcttgcacatcaacgattataaggaggctgtgcagtgtgtggatgagctg
gacatgtcctctcagctccatgtgtttgtgcgtgtgggggtggagtccactctggagcgc
agtcagatcacacgggaccacatgggcaagctcctcttccagttggtgcagcaggacatc
ctggccaagccccagttcttcaaagggtttgctgacacccttgagctggcggatgacatg
gccattgacattccccatatctggctgtatctggccgagctgctcagccctgtgctgaga
gacaggggcttctctatgagagagctctttagtgaattaagcaaacctttacttcctgtg
ggaagagctgggatcttattttctgaaatactgcacatactatgcaaacaaatgagccat
aggaaagtgggcaccttgtggagagagtcaggcctcagctggagtgacttcttgccagag
ggagaggatgtccaggatttcatctcagagcagaagctccagttcactgaggcggactgc
tccagccatgaggcagccctcgccacgacagcactgtcccttgtggtgctcaaccagcag
ctagagagactgctgctggaggacatggccagtgatgagcagatctttgactgggtagag
gcaaatctagatgaatctcagatgagctcctctccgttcctgagagctctgatgacggct
gtgtgtaaggcagcggtgaaagatgaaagtgcttcctgtcgagtggacgtagccatcatt
cagaggagattgcccgtattactcaagtaccttaactcagacactgagcgacagcttcaa
gcactttatgcactgcaggcgctgatagtcactttggatcagcctcctaacctgctccgg
atgttcttcgattgtctgtatgatgaggacgtgatctcggaggacgctttttacaagtgg
gagaccagcaaagacccagcagaggagctgggcaagggtgtggctctcaagtctgtaacg
gctttcttcacctggctgagggaagccgaggaggagtcggaggataattga
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integrated database retrieval system
