Salvelinus sp. IW2-2015 (Arctic char): 111970161
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Entry
111970161 CDS
T05762
Name
(RefSeq) E3 ubiquitin-protein ligase DTX3L isoform X1
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
111970161
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
salp04121
]
111970161
Enzymes [BR:
salp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111970161
Ubiquitin system [BR:
salp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
111970161
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
KH_DTX3L
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_2
zf-C3HC4_3
zf-RING_10
HTH_DNAJC9
zf-C3HC4_4
zf-RING_4
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
111970161
NCBI-ProteinID:
XP_023852474
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All DBs
Position
LG11:30716483..30723501
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AA seq
840 aa
AA seq
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MAENDVDMVEVGDNNVKKTDVEVLGWRQRRLMDLYLTDDESDKGLDTPPQGTDLYRSKEE
MSLDPPAGGAAGSNKDRQSQRDQHSPINSQRTQDVDLNQAKVEERKQPSASPDEATVYVT
VKWPRKDLPPKWKSTLEKTLQSWLNKDFGDKTTDCTLKGLYYNGSWAEVKISPSTDLKVL
LNRRATQMTFKDEAKTTATVQFHKTAPSTPWNQSDCKPSSIDGSPPTSHTPQDVKLPVTV
HTIIDLSGIPHEAQVSLQTRFSQYRTYHSLTFTGNFEEGEKFYREVHKVIKEAEAGPAGD
WNGLAVTASMTHKGMNTHEAPGQKEMRFPVPLTLFGYMNQAYQKEMEDIEKRNGVKINAD
VKVSIKEDSAKTGRDFLLPEAYQELIDLFQKCAGDFDSISAHLPHMNLEDLQNTLKNIQN
EESRLVLNVSANSCNVFGPKQSMVAVGKAFGVGHSSTVKTFGMDHSSTDEAFGSGRRSTE
IPQKIVLDIKDPLVSSGLSMDPAHWELIKKIFDEKIKAIQNKFGVVFMNNPSXGKVRVTT
RPIKSQHTASLECHAIRALMHLYQKVATSTMSCYLLDTTQAGTVGDMLEKIRSRHQCVGA
GENYGPWRLIGLPEHLGPAVKELEEKLGGHVFKEEDKQRIVYPEDFNTGAAEVGAAGEAT
CPICMDIFTNKEKLSCTHEFCKECLRRSVETMGPSCPVCKDVYGKVEGDQPDGTMKHTIS
YTNLPGFTQCDTIVINYDIPDGKQTKKHPNPGKHFYGTKRMAYLPNNMEGNEVLKLLKKA
FNQRLIFTVGISRTTGAENVVTWNDIHHKTNIEGGAQNFGYPDHDYLRRVKDELKAKGIK
NT seq
2523 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaaatgacgttgacatggtggaagtgggtgataataatgtgaagaagacagat
gtggaggtcctgggctggcgacagaggcggcttatggacctgtatttgacagatgatgaa
tctgacaaaggactggatacaccaccccagggcacagatctgtatcggtcaaaggaggag
atgagtctggatcctcctgctggaggagctgctggctctaataaagacagacaatcacag
agagatcagcattctcccatcaactcccaaaggactcaagatgtggatctgaatcaagct
aaggttgaagagagaaagcagccatcagcatctccagatgaggctacagtctacgtcact
gtgaagtggcctaggaaagaccttccaccaaaatggaaatctacactagagaaaactctc
cagtcatggctcaataaagactttggtgataagactacagattgtaccttgaaaggtctt
tattacaatgggtcatgggctgaggtcaagataagtccctcaacagatctaaaagtactt
ctgaatcggagggcaacacagatgaccttcaaagacgaggccaagacaaccgctactgtg
cagtttcacaaaactgcaccatctacaccctggaaccaatcagactgtaaacctagctca
atagatggctctcctccaacatcacacactccacaggatgtcaaactcccagtgactgta
catactatcattgatctcagtggcatcccacatgaagcacaggtttcccttcagaccagg
ttcagtcagtaccgcacttatcactcactgacctttactgggaactttgaggaaggggag
aagttctacagagaggtgcacaaggtcatcaaggaagctgaggctgggccagcaggtgat
tggaatggtttagcagtgacagcaagcatgactcacaagggaatgaacacccatgaagcc
cctgggcaaaaggaaatgagatttccagtcccactgaccctctttgggtacatgaaccag
gcctaccagaaggagatggaggacatagagaaaagaaatggagtcaaaatcaatgcagat
gtgaaggtgtccatcaaagaagattcagcgaaaacaggtagagattttctgctgcccgaa
gcctaccaggagttaattgacctcttccagaagtgtgcaggtgattttgacagcatctcr
gcacatctgccacacatgaatctagaagacctccagaatacgctgaagaacatccagaat
gaggagtccaggctggtgctgaacgtgtccgccaacagttgcaatgtgtttgggccgaag
cagagcatggtagcagtcgggaaggcttttggggtgggccacagctccacagtgaagacc
ttcggaatggatcacagctccacagatgaggcctttggatctggaaggagatctacagag
attccacagaagattgtgcttgacatcaaagacccactggtgtcaagtgggctgtccatg
gacccagcccactgggagctgattaaaaaaatatttgatgaaaaaataaaagcaatccaa
aataaatttggagtagttttcatgaataatccctctcyggggaaggtcagagtgacaacc
agacctatcaagtcccaacacactgcctctctggaatgccacgccatcagagctctcatg
cacctctaccagaaggttgccacgtcaacaatgagctgctacctgctagacactacccag
gcagggactgtgggggatatgctggagaagatccgctctcgacaccaatgtgttggggca
ggagaaaactacggtccctggaggctgattggcctaccggagcatttaggccctgctgtc
aaagagcttgaagagaagctgggtgggcatgtgtttaaagaggaagacaagcagaggatt
gtgtatcctgaagacttcaacacaggagcagctgaggtgggagcagctggagaagcgaca
tgccccatatgcatggatatatttaccaacaaggagaagttgtcgtgcacccatgagttt
tgtaaagagtgtctgaggcggtcagtggaaaccatgggccccagctgtcctgtgtgtaag
gatgtgtacgggaaggtggagggagaccagcctgatggaacaatgaaacacactatttct
tacaccaacctacctggattcactcaatgtgacacgatagttatcaactatgatattcca
gatggaaaacagacgaagaaacatcccaaccctggaaagcacttctatgggaccaaaaga
atggcttatctacccaataacatggaggggaatgaggtcctgaagctgctgaagaaagca
tttaatcagaggctgattttcacagttgggatctccagaaccactggggcagagaatgta
gtgacctggaatgacattcaccacaaaaccaacatcgaaggaggggcacaaaatttcggc
tatcctgaccatgactacctgagaagagtgaaggatgagctgaaagccaaaggcatcaaa
tga
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