Salvelinus sp. IW2-2015 (Arctic char): 111970165
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Entry
111970165 CDS
T05762
Name
(RefSeq) LOW QUALITY PROTEIN: rhomboid-related protein 3
KO
K02857
rhomboid-related protein 1/2/3 [EC:
3.4.21.105
]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
salp01002
]
111970165
Enzymes [BR:
salp01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.105 rhomboid protease
111970165
Peptidases and inhibitors [BR:
salp01002
]
Serine peptidases
Family S54: Rhomboid family
111970165
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhomboid
EF-hand_7
EF-hand_6
EF-hand_1
DUF5580_M
EF-hand_5
EF-hand_11
EF-hand_9
AIF-1
EF-hand_8
Motif
Other DBs
NCBI-GeneID:
111970165
NCBI-ProteinID:
XP_023852883
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Position
LG1:complement(3347899..3418710)
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AA seq
430 aa
AA seq
DB search
MPDASRDVPVHSSPAVAANAEGDEIEVLESIDVLPVAPEDQWKSLFDKFDSESSGFISTE
RFRDLLAAHGSELDPHKLEVLLALADGNADGKICYQDFVNLMSNKRSKSXAAILQGSRQL
KGAGALGEEVGLGLSQRLVRHIAYETLPREIDRKWYFDSYTCCPPPWLILAITIAEVAVF
MYYGLQLDRWVLQVSSPHFLRGPLPYHPQLRIQAWRYLSYAFMHAGIEHLGLNMAMQLLV
GVPLEMVHGALRIGLVYVCGVLAGSLAVSVTDMTAPVVGSSGGVYALVSAHLANVVMNWS
GMKCQFKLFRMAMALVCMSVEFGRAVWLRFYPPAFPPCPNPSFVAHLGGVMVGLTLGVVV
LQNYEQRLQEQSLFWIFFSVYLLFVLCAVFWNGLRPSVDVRLPPRCELQGGYMSCTPPQP
LRPPNKDWSQ
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgccggacgcgtctcgggacgtgccggtgcattcctctccagcagtggcggcgaacgcg
gagggagacgagatagaagtgctggagagtatcgatgttcttcccgtggccccagaggac
caatggaaatctctgttcgacaagttcgactcagagagttcaggattcatcagtacagag
cggttcagggacctgctggcggcccacggctcggagctggaccctcacaagctggaggtt
ctattggccctcgccgacggcaacgcagacggaaagatctgctaccaggactttgtcaac
ctgatgtccaacaagcgcagcaaaagcntcgcggccatcctccagggaagtcgtcagttg
aaaggggccggggccctgggggaggaggtgggtctgggtttgtcccagaggctggtgagg
cacatcgcctacgagaccctgccccgggagatcgacaggaagtggtacttcgacagctac
acctgctgcccaccaccctggctcatcctggctatcaccatcgctgaggtggcagtgttc
atgtactatggcctgcaattggaccgctgggtgctgcaggtgtccagtccccacttcctg
aggggcccactgccataccacccccagctacggattcaggcctggagatacctcagctac
gccttcatgcacgcagggatagaacacctgggtctgaacatggccatgcagctgctggtg
ggagtccctcttgagatggtccatggagcgctgaggataggactggtctacgtgtgtggt
gtactggcaggctcccttgccgtctctgtcactgatatgactgctccggtggtggggtcg
tctggaggagtctacgccctggtctcagcacacctggccaacgtcgtcatgaactggtcg
ggtatgaaatgtcagtttaagctgtttcggatggccatggctctggtctgcatgagtgtg
gagtttggccgtgccgtgtggctgcggttctacccgccggccttcccgccctgccccaac
cccagctttgtggcccacctggggggtgtgatggtggggctcaccctgggggttgtagtc
ctccagaactacgagcagcgtctccaagagcagtctctattctggatcttcttctctgtc
tacttactctttgtcctctgtgctgtcttctggaacggtcttcggcctagcgtggacgtc
cggctccccccacgctgtgagctccaaggtggctacatgagctgcacccccccccagccc
ctcaggcctccgaacaaggattggtctcaatag
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