Salvelinus sp. IW2-2015 (Arctic char): 111970220
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Entry
111970220 CDS
T05762
Symbol
stx16
Name
(RefSeq) syntaxin-16 isoform X1
KO
K08489
syntaxin 16
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
111970220 (stx16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
salp04131
]
111970220 (stx16)
Membrane trafficking [BR:
salp04131
]
SNARE
Syntaxin (Qa)
Stx-TGN / EE
111970220 (stx16)
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GFIT
Motif
Pfam:
SNARE
ATG17_like
Syntaxin_2
UCH_1
DUF5345
MCPsignal
Orf78
DUF2116
Motif
Other DBs
NCBI-GeneID:
111970220
NCBI-ProteinID:
XP_023852589
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Position
LG11:32821085..32839133
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AA seq
332 aa
AA seq
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MATRRLTDAFLLMRNNAIQNRHILAEQVSTYGTRRTLSTRSNAADAGPFTNAVYELDELA
DDRMALVSGIRLDPEAAIGVTKRLPPKWVDGVDEIQYEITRVRQKKKELAALHDKHMNRP
TLDDSSEEEHAIEITTQEITQMFHRCQRAVTGLQSRCGHCTEQEERLLRNVVSSLAGSLQ
ELSTNFRHTQSSYLKRMKNREERSKHFFDSGPLMEDEDIALYDRGFTGDQLVLVEQNTVM
VEEREREVRQIVQSISDLNEIFRDLAGMVVEQGTVLDRIDFNVEQSCVKTEEGLKQLQKA
EQYQKKNRKMLVILILTVIVVVLILILFGTKF
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atggcaactaggcgcttgaccgatgccttcttattaatgcggaacaatgcaatccaaaat
cgtcatatattggctgagcaagtgagtacatacggcacccgtcgtactctgagtacacgt
agcaatgctgcggatgcagggccttttacaaatgctgtctatgagcttgatgagttggct
gatgaccgcatggccctggtctctgggatacgtttggacccagaagctgccatcggagtc
accaagagactgccgcccaagtgggtagatggggtagatgagattcagtatgaaatcaca
cgggtccggcagaaaaagaaggagctggccgccctccatgataagcacatgaaccgtccc
accctggatgayagcagtgaagaagagcatgccatagagatcactactcaggagatcaca
cagatgttccaccggtgtcagcgtgcggtgacaggtctgcagtctcgctgtggccactgc
acagagcaggaggagaggcttctgagaaatgtggtgtcctcgttggcagggagcctgcag
gagctgtccaccaacttcagacacacacagtccagttacctgaaacgcatgaagaatcgc
gaggagagatcaaagcacttttttgactccggtcctctaatggaggatgaagatatagca
ctatatgacagggggtttacaggtgaccagctggtcctggtagagcagaacacagtgatg
gtggaggaacgtgagagagaggtcagacagatagtccagtccatctctgacctgaatgag
attttccgagacctggctggaatggtggtggaacagggcacagtacttgacagaattgac
ttcaatgtggagcaatcgtgtgtcaaaacagaagaggggttgaaacagttacaaaaggct
gaacagtatcagaagaaaaaccgaaagatgctggtcattttaatccttactgttatagtt
gtcgttctaatacttattctatttgggaccaagttctag
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