Salvelinus sp. IW2-2015 (Arctic char): 111970343
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Entry
111970343 CDS
T05762
Symbol
csf1
Name
(RefSeq) LOW QUALITY PROTEIN: macrophage colony-stimulating factor 1
KO
K05453
macrophage colony-stimulating factor 1
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04010
MAPK signaling pathway
salp04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
111970343 (csf1)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
111970343 (csf1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
salp04052
]
111970343 (csf1)
Cytokines and neuropeptides [BR:
salp04052
]
Cytokines
CSF and other factors
111970343 (csf1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CSF-1
Motif
Other DBs
NCBI-GeneID:
111970343
NCBI-ProteinID:
XP_024003093
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All DBs
Position
LG11:complement(38837822..38869869)
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AA seq
564 aa
AA seq
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MNTHKPAHKAKARHLCFVVLLCFPLAWAGVPGPCRHSVTKGHLLNLNRLIDNQLENGCSI
TYVFTELQSLSEVCYVKAAFPQILELLNTNFNYVMKSDNGRYVKSLKKVIYNLYSHNCIP
EINEEIEDNPVKFVRVHSTSPREALRKARXVIEMYMTLMTKSNGPVDWNCEEEYAEDYPE
SATVLPTPTKAEPEPEHQCACPTVGPVAPDVSLVSHSVWSSPPQPTLSQSPNXMQPRPPH
PPLGTHSADPGVFLGSPGTIGPPSLRELQVTVPDGHSLGEGREGELHWDSRPPPPTGTES
DSALYKTGSNPPSATDHPLMSSPPSLVLMETVGSKHKGFYYPQTERAMEASADKPAGRGA
AGSPHDLFIVPGVKLVTPVPFLYKVMGITLSSDESTAYVLAKRSLDVSTETPQLEDTTKT
YPSTERYSHDWNHPIGSTTTEASPHWKMTEEEPDKLHTTTKVLGQIRKTESKHTRTYYEE
VLSTDILSEKTDVDDAPISERPSEGSEKKFQNGKTGHYDSSTYYQTAFIIASMCGGLLLI
TTLFSEKKRLRALLYSANIIENQR
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgaacacacacaaaccagcccacaaagccaaggctaggcatttgtgcttcgtcgtcctc
ctctgcttccctttggcgtgggctggcgtccctggtccatgtcgacactctgtgacaaag
ggtcacctcctcaacctcaatcgcctgattgacaatcagttggagaatggctgttcaata
acctatgtatttactgagctccagagtttgagtgaagtctgttatgtgaaagcagccttt
ccacaaatcctggagcttctgaacacaaacttcaattatgtcatgaagtcggacaacgga
cgctatgtcaaatccctgaagaaggtcatatacaacctttactcccacaactgcatacct
gaaatcaacgaggagattgaggacaacccagtgaagtttgtgagggtgcacagcacctcg
cccagagaggctctgaggaaagcccgcygggtcattgagatgtacatgaccctgatgacc
aagagcaacgggcctgtcgactggaactgtgaggaagagtacgctgaggattacccagaa
tccgccactgtcctccccaccccaaccaaagctgaacctgaaccggaacaccagtgtgca
tgtccaacagtgggtccggtggcccctgatgtctccctggtctcccacagtgtatggagc
agtcccccacagcccaccctctcccagtcccccaacnncatgcaacccaggcctcctcac
ccaccattgggtacccacagcgctgaccctggggtgttcctagggagtcctggtactata
ggacccccctcccttagggagctgcaggtgactgtccccgatggacattcacttggagag
ggcagagagggggagttacactgggattctcgtccacctccacccactggaactgagtca
gactctgcactctataaaacaggctcgaaccccccttctgccacagaccaccctttaatg
tcttcccctcccagcctagttctcatggagactgttggatccaagcacaagggtttttac
tacccccagactgaaagggcgatggaggcttctgcagacaaaccagcagggagaggagca
gcaggttcaccacacgatctctttattgtccctggggtcaagctggtcacacctgtccct
ttcttgtacaaggtgatgggcatcaccctcagtagtgatgagagcactgcctatgtgttg
gccaagaggtcactggacgtttcaacagagacccctcaactagaggacactacgaaaaca
tacccaagcacagagagatattcacatgactggaaccatccgattgggagcactacgact
gaagcatctccacattggaagatgacagaggaggagccagacaaactacacaccactaca
aaggtcctgggccaaatcaggaagactgagtcaaaacatactaggacatactatgaggaa
gtcttgagcacagatatcctgtcagagaagacagatgtggatgacgctcctatttcagaa
aggcccagtgaaggctcagagaagaaattccagaatgggaaaactggtcattacgattcc
agcacctactaccagacagcctttatcattgcatccatgtgcggcggacttctcctcatc
acaacactattcagtgagaaaaagagactccgagcccttctctacagtgccaacataatt
gaaaaccagaggtaa
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