Salvelinus sp. IW2-2015 (Arctic char): 111970368
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Entry
111970368 CDS
T05762
Name
(RefSeq) peroxisome proliferator-activated receptor delta
KO
K04504
peroxisome proliferator-activated receptor delta
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp03320
PPAR signaling pathway
salp04148
Efferocytosis
salp04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
111970368
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
111970368
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
111970368
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
salp03000
]
111970368
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
salp03310
]
111970368
Transcription factors [BR:
salp03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
111970368
Nuclear receptors [BR:
salp03310
]
1. Thyroid hormone like
1C. Peroxisome proliferator-activated receptor (PPAR)
111970368
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Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
111970368
NCBI-ProteinID:
XP_023852829
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Position
LG11:39676889..39730809
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AA seq
540 aa
AA seq
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MEGTRAAVLAPVKSKAPRRDRKRRVGALVRKGGVCRNGTTSPPGECTSDGARGLESSLEV
LKPSLLSKGLGERVGEKEGVRGAEVSPEREEGFGSWDMKSHDEEVVQQEQEDQQEKGSSN
NHSTSNTDSPALSSSCTDLSQTSSPSLSDQLLLGREDGTGAGINVECRICGDKASGFHYG
VHACEGCKGFFRRTIRMKLDYERCERSCKIQKKSRNKCQYCRFQKCLLLGMSHDAIRYGR
MPEAEKRKLVAGLLAGEKVPTTNPNGSDLKSLAKRVNNAYLKNLNMTKKKARSILTGKTS
SSPVAYPYPFVIHDMDSLCQAENGLVWKQLINGTTPNKEIGVHVFYRCQCTTVETVRELT
EFAKSIPGFVDLFLNDQVTLLKYGVHEAIFAMLPSLMNKDGLLVANGKGFVTREFLRSLR
RPFSEIMEPKFEFAVKFNALELDDSDLALFVAAIILCGDRPGLINIKQVEEIQDNILQAL
DQHLLANHTDSKYLFPKLLNKMADLRQLVTENAMLVQKIKKTESETSLHPLLQEIYKDMY
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggagggcaccagggccgccgtcttagcaccggtcaaaagcaaagcccctcgacgggat
cggaagcggcgtgtcggggctttggtaaggaaagggggagtctgccggaacgggaccacc
tccccccctggggagtgcacatcggacggagcgagggggcttgagtcctccttggaggtg
ctaaaaccatccctgctgtcgaaggggctgggagagagagtgggggagaaggagggggtg
cgaggagcagaggtgtcacctgagagggaggagggctttggctcctgggacatgaagtct
catgacgaagaggttgtgcagcaggagcaagaggatcagcaggagaaggggagtagtaac
aaccacagcacctccaatacggacagccctgccctctccagtagctgcacagatctgtcc
cagacgtcgtctccatcgctgtcggaccaactcctcctgggtcgagaggatgggacgggg
gccgggatcaatgtggaatgtcgtatctgtggagacaaggcctcagggttccactatgga
gtacacgcctgtgagggttgcaaggggtttttccggcggaccatccgtatgaagctggac
tatgagcgctgtgagcgcagctgtaagatccagaagaagagcagaaacaagtgccagtac
tgccgcttccagaagtgcctgctgctgggcatgtcccatgacgcgatccggtatggccgc
atgccggaggcagagaagaggaagctggtggcgggcctcctggcgggagagaaagtcccg
accaccaaccctaatggctcagatctcaaatccctggccaagcgagtcaacaacgcctat
ctgaagaacctcaacatgaccaagaagaaggctcgcagcatcctcaccggaaagaccagc
tccagcccagtagcgtatccatatccctttgtgattcacgacatggactccttgtgccag
gctgagaacgggctggtgtggaaacagctgatcaacggcacgacccccaacaaggagata
ggggtacacgtgttctaccgctgccagtgcaccacggtggagacggtcagggagctcact
gagttcgccaagagtatccccggcttcgtagacctcttcctcaacgaccaggtgacgctg
ctgaagtacggcgtccacgaggccatcttcgccatgctgccctcgctcatgaacaaggac
gggttgctggtggccaatgggaagggctttgtgacccgagagttcctgcgcagcctgcgg
cgccccttcagcgagatcatggagcccaagtttgagtttgcggtcaagttcaacgccctg
gagctggatgacagtgacctggccctgttcgtggccgccatcatcctctgtggagaccgt
ccggggctgataaacatcaagcaggtggaggagattcaggacaacatcctgcaggccctg
gaccagcacctgctggccaaccacactgactcaaagtaccttttccccaagctgctcaac
aagatggctgacctgcgccagctggtaactgagaacgccatgctggtccagaagatcaag
aagacagagtccgagacctcgctgcacccgctgctgcaggagatctacaaggacatgtac
tga
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