Salvelinus sp. IW2-2015 (Arctic char): 111970371
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Entry
111970371 CDS
T05762
Name
(RefSeq) laminin subunit beta-3
KO
K06244
laminin, beta 3
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04510
Focal adhesion
salp04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
111970371
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
111970371
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Gene cluster
GFIT
Motif
Pfam:
Laminin_EGF
Laminin_N
KASH_CCD
GldM_1st
AAA_13
LXG
APG6_N
Fez1
Gp58
ATG17_like
Laminin_I
Prominin
HAUS-augmin3
MAD
CCDC93_CC
COG6_N
Motif
Other DBs
NCBI-GeneID:
111970371
NCBI-ProteinID:
XP_023852831
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Position
LG11:complement(39775500..39793180)
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AA seq
1162 aa
AA seq
DB search
MWILFQLAALTAVAATQRDCSQGACYPPMGDLLLGRDRQLHASSTCGLTGSEVFCTPFGQ
SKMKCCPCDSRNPSSQLAHTIQDVLSTAGPNRWWQARKDVSPVTVQLDLQNLFQLDTLVL
TFKGPRPSALVVERTLDNGKTWQPALYMASDCRSAFPGIAMTTPRSLDQTYCYTLPPATT
NPYQDQTIQFSPLRQFSTISVPNGQKIQEVSGLSGLRVRLTNLGAVPRLPGRAPSLFYAL
REMRVMGTCLCHGHANRCLPDTNQLPHTQVSAQCECQHNTAGINCERCADLYNDLPWRPA
EEGDTHTCKRCECNNHAQRCRFDPDVYESSGRRSGGVCESCLHHTTGPKCDRCAPGYQPN
HRSSMDRPDACIRCHCSAEGVENGDQCDDVTGSCRCKANVDGSQCDRCKMGYYGLTASNP
LGCNKCLCSKDGSLSSVCDPVSGQCPCRPHLQGLTCELCSHGYWNPSSPRGCEPCHCDPT
NSHGDTCDQSTGQCQCRSGFGGRTCTECPDNTYGDPLIGCRSCQCAAGGTEPGGCDKRTG
ACRCRLGVTGARCDACTRGHCDSFPDCEVCPSCFFSLDSNIQNLTLGLEKLSSRIPSLPG
GSLPTSLGPRIRTLEATLTQIRDSLPLPPPSARQVNDALSQLRRLRDQLDQVDGDLSPQG
RAPELGTQLDELQALLDGLGLVYNTKRDALRNSVNSNNAGAFSSIKDAYDESTDSAKSVD
ASGKTVDQSKAVRKDAFDLQNQVQPANTRDLEKLSHQLNTKPDLTPTAKQVCGSMRFAPC
TPAQCDGELCPAEEAPPCGRGERCVGALPLGTRAVNDAEEVKDRLKQLNGKITQAAAQIQ
ETQDTANKVRQSTDDLDNQMRRARDDLDADLQETRDFVKELKDFLSDPSSDPTHISTVSE
WILNAKLPVSLATLKRKLQEIRDLAAGLPDSTAVLDQAGPQLDTARRLLQEARDARDAAL
GVKADVDGLLEGFTTVEGSLSGLEEKVQESLDIVDDISSNLTQTKAQLSPAVKALGEVSA
LAEGMKPQLEGLRALVRSGDMLAQNATEEADKAKREADAAAKELASLEKQLEQLRAAERT
SGRGDGTGTAGARLQKLQEEAGSLAQDTGDMIKALAGKADSLHSLQDEVLLKSQRLTGLE
AKLLDLVADMRQKVTIFSTCQG
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
atgtggattttattccagttagcagccctgactgcagtggctgcgacacagagggactgt
tctcagggggcctgttacccccctatgggagacctgctcctgggtagggaccgtcagctc
cacgcctcctccacctgcggcctcaccggctcggaggtcttttgcacccccttcggacag
tcgaagatgaagtgttgtccctgtgactccaggaacccatccagtcagttggctcacacc
atccaggatgttctatccactgctggacccaacaggtggtggcaggccaggaaagatgtg
agtccagtcaccgtacagttggacctacagaacctgtttcagctggacaccctcgttctg
acattcaagggtcctcgtcccagtgcgctggtggtggagaggacgctggataacggtaaa
acatggcaacctgctctctacatggcctcagactgcagatcggccttccctggcattgcc
atgactacgccacgttccctggaccagacgtattgttacactctgccccccgccaccact
aacccctaccaggaccagacgattcaattcagccccttgcgtcagttctctaccatcagc
gtccccaatgggcagaagattcaagaggtatcaggattgtcaggcctgcgagtgaggctg
actaatctgggtgctgtgccccgcctgccgggccgcgctccctctctgttctacgccctc
agagagatgagagtgatgggcacctgcctctgccacggccatgccaaccggtgtctgccg
gatactaaccagctacctcacacacaggtcagtgctcagtgtgaatgccaacacaacaca
gcaggtataaactgtgagcgctgtgcagatctttacaacgacctgccctggagacctgca
gaggagggggacacacatacctgcaaacgttgtgagtgtaacaaccatgcccagcggtgc
cgttttgacccagatgtgtatgagtcgagcggacggaggagtgggggggtgtgtgagagc
tgtctgcaccacacgactggacccaagtgtgaccgctgtgcccctggataccaacccaac
caccggagcagcatggaccggcctgatgcctgcatacgctgtcattgcagtgctgagggg
gtggagaatggggatcagtgtgatgacgtcacagggtcctgtcgctgtaaggccaatgtt
gatggatcgcaatgtgaccgctgcaagatgggatactacggtctgaccgcctccaaccct
ctgggctgcaacaagtgcctgtgcagtaaagacggatccctgtccagtgtgtgtgaccct
gtgagtggtcagtgtccttgccgacctcatctccaggggctgacctgtgagctgtgttcc
catggttactggaatccatcctctccccgtggttgtgagccctgtcactgtgaccccacc
aactcccatggtgacacctgtgaccagagtaccggtcagtgtcagtgcaggtcagggttc
ggaggtcgtacctgtacagaatgccctgacaacacctacggagacccactcattggctgc
agatcgtgtcagtgtgctgctgggggcacagagccaggaggctgtgataagcgtacgggg
gcctgccggtgccggctgggtgtcacaggtgcccgttgcgatgcctgtacccgtggccac
tgtgactccttccctgactgtgaggtctgcccctcctgctttttctctctggactcgaac
atccagaacctcaccctgggcctggagaaactctcctccaggattccctctcttcctggg
ggctcattacctaccagtctgggtccccgcatcagaaccctggaggccactctcacccag
atacgagactctctcccactgccacctccctctgccagacaagtcaacgacgccctctct
cagctccgcaggctaagggaccagttggatcaggtggatggagatttgtcaccccaaggc
cgagcccctgagctaggcacacagctggacgaactccaggctctactggacggcctgggt
ctggtgtacaacaccaagagagatgctctcaggaactctgtcaactccaacaatgcaggg
gccttttcttccataaaggatgcctatgacgagtcaactgactctgccaaaagtgttgat
gctagtgggaagactgtagaccagtcaaaagcagtcagaaaagacgcctttgacctccag
aaccaggtccaaccagccaacaccagagacctggagaaactcagtcaccagctgaacacc
aaacctgacctcacacccactgccaagcaggtgtgtggcagcatgcgctttgccccctgt
acccctgctcagtgtgatggtgagctgtgtcctgcagaggaggcgccaccctgtggccgt
ggggagcgttgcgtcggggctctgcctctggggacccgggctgtgaatgatgctgaggag
gtgaaagacagactgaagcagctcaatgggaagatcacacaggccgctgcacagatccag
gaaacacaggacacagccaataaggtcagacagtccacagacgatctggacaatcagatg
aggcgggccagggatgacctggatgcagatctgcaggagacgagagactttgttaaagag
ctgaaggacttcctgtcagacccatcatcagacccgacacacatcagcacagtgagtgag
tggatcctgaatgccaagctgcctgtcagtctggctactctgaagaggaagctccaggag
atcagagacctggcggcaggactcccagacagcactgcagtcctggaccaggctggacca
cagctcgacaccgcccggcgcctgctacaggaggctcgggacgccagggacgcagcgctg
ggtgtgaaggctgatgttgacgggctgttggagggcttcactacagtggagggctccctc
tctggcctggaggaaaaagtgcaggagagcctggacatagtggatgacatcagcagcaac
ctcacacagaccaaggcccagttgtctccagcggtgaaggcgctaggggaggtgtctgcc
ctggctgaggggatgaagcctcagctggaggggctcagggctctggtgcgctctggagat
atgctggcccagaatgcaacagaagaggccgataaagctaagagggaggcagacgctgcg
gccaaggagctggcatccctggagaagcagctggagcagctgcgtgctgcagagaggacc
agtgggcgtggcgatgggacggggacagcaggggcgcgtctccagaagctgcaggaggag
gctggttctctggcccaggacactggagacatgataaaggcactagcaggtaaagcagac
tctctgcatagtctacaggatgaggtcctactgaagtcccagaggctgactggcctggaa
gccaaactgctggaccttgtggctgacatgagacagaaggtcacgatcttctccacctgc
cagggctga
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